RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CLYBLQ8N0X4 340 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TUBGCP3Q96CW5 907 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 FAR2Q96K12 515 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 APEX2Q9UBZ4 518 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 NDUFS2O75306 463 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TOMM70O94826 608 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 SUPT7LO94864 414 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 EYA4O95677 639 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 HSPA9P38646 679 aaKnown RBP10.35□□□□□ -0.75
COL11A1-201ENST00000353414 MAPRE2Q15555 327 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ICE2Q659A1 982 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TRIM72Q6ZMU5 477 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 AGPAT5Q9NUQ2 364 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 IPPQ9Y573 584 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TRIM17Q9Y577 477 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 PCDHB12Q9Y5F1 795 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 SPACA6W5XKT8 324 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 CCDC188H7C350 402 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ACOX2Q99424 681 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ATXN3LQ9H3M9 355 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 SOHLH2Q9NX45 425 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 DAGLAQ9Y4D2 1042 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ERI2A8K979 691 aaKnown RBP10.35□□□□□ -0.75
COL11A1-201ENST00000353414 PHF20L1A8MW92 1017 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 CLUP10909 449 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 EPHB3P54753 998 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TAP1Q03518 808 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 RBBP4Q09028 425 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 CCDC103Q8IW40 242 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ADAM32Q8TC27 787 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 COL26A1Q96A83 441 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 IL17RAQ96F46 866 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 RBM15Q96T37 977 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL11A1-201ENST00000353414 SH3BP4Q9P0V3 963 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 RNF14Q9UBS8 474 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 NUDT5Q9UKK9 219 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 SPATA31A3Q5VYP0 1347 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ADCY10Q96PN6 1610 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ARHGEF12Q9NZN5 1544 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 PDZK1P1A8MUH7 402 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 CST8O60676 142 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 EPHA7Q15375 998 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TTC39BQ5VTQ0 682 aaPredicted RBP10.35□□□□□ -0.75
COL11A1-201ENST00000353414 MTHFD1LQ6UB35 978 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 FAM124AQ86V42 546 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 MMGT1Q8N4V1 131 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
COL11A1-201ENST00000353414 CELF6Q96J87 481 aaKnown RBP10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ZMYM5Q9UJ78 669 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 DLGAP3O95886 979 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 VCLP18206 1134 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TGM2P21980 687 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 GARTP22102 1010 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 PLD1Q13393 1074 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TAF5Q15542 800 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 BBS7Q8IWZ6 715 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 TUFT1Q9NNX1 390 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 ALKBH4Q9NXW9 302 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 DYRK1BQ9Y463 629 aa10.35□□□□□ -0.75
COL11A1-201ENST00000353414 USP6P35125 1406 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 NR5A2O00482 541 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 FAM107AO95990 144 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 IGKV5-2P06315 115 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 NR3C2P08235 984 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 GPR1P46091 355 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 NUDT2P50583 147 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 SCNN1BP51168 640 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 NECTIN1Q15223 517 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 CNGA2Q16280 664 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 XKR3Q5GH77 459 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 TYW3Q6IPR3 259 aaKnown RBP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 AHI1Q8N157 1196 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 HERC5Q9UII4 1024 aaKnown RBP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 POLBP06746 335 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 ADRA2BP18089 450 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 PCSK1P29120 753 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 KYAT1Q16773 422 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 OSMRQ99650 979 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 IRX2Q9BZI1 471 aaPredicted RBP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 KLHL1Q9NR64 748 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 SHROOM2Q13796 1616 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 OVOS2A0A0G2JMS6 1433 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 OVOS2A0A0J9YW53 1432 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 OVOS2Q6IE36 1432 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 MGAT4DA6NG13 374 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 TRDMT1O14717 391 aaKnown RBP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 CCDC22O60826 627 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 PTGER2P43116 358 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 TAF13Q15543 124 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 DNAJB3Q8WWF6 145 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 MRPL39Q9NYK5 338 aaKnown RBP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 TMA7Q9Y2S6 64 aaKnown RBP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 H7C1W4 665 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 STXBP3O00186 592 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 CCNT2O60583 730 aaKnown RBP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 KRT33AO76009 404 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 PYGMP11217 842 aa10.34□□□□□ -0.75
COL11A1-201ENST00000353414 ACAT1P24752 427 aaKnown RBP10.34□□□□□ -0.75
COL11A1-201ENST00000353414 EPHX2P34913 555 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms