RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 TXNDC9O14530 226 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 COPEO14579 308 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 ZWINTO95229 277 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 TGM2P21980 687 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 EPHB1P54762 984 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 DLG4P78352 724 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 ACTN3Q08043 901 aaPredicted RBP12.69□□□□□ -0.38
SMAD9-201ENST00000350148 DCAF6Q58WW2 860 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 SPOCD1Q6ZMY3 1216 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 ZBED8Q8IZ13 594 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 SPATA18Q8TC71 538 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 SYT15Q9BQS2 421 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 MORF4L1Q9UBU8 362 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 RASA4BC9J798 803 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 DHX15O43143 795 aaKnown RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 RASA4O43374 803 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 ILF2Q12905 390 aaKnown RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 HSP90AA5PQ58FG0 334 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 FAM43BQ6ZT52 329 aaPredicted RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 PID1Q7Z2X4 250 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 IRF2BP2Q7Z5L9 587 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 EIF3HO15372 352 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 NCAM2O15394 837 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 FKTNO75072 461 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 RBP3P10745 1247 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 SLCO1A2P46721 670 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 ALDH7A1P49419 539 aaKnown RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 GHRHRQ02643 423 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 IRF5Q13568 498 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 MAP3K21Q5TCX8 1036 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 PPP2R3CQ969Q6 453 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 GRAMD1AQ96CP6 724 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 TLR10Q9BXR5 811 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 PSMD7P51665 324 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 ARHGEF2Q92974 986 aaKnown RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 CAVIN3Q969G5 261 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 HSFY1Q96LI6 401 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 TRIM51Q9BSJ1 452 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 NEU2Q9Y3R4 380 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 WNK3Q9BYP7 1800 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 C3orf70A6NLC5 250 aaPredicted RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 RECQL4O94761 1208 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 MICAL2O94851 1124 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 TPD52P55327 224 aaPredicted RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 KATNAL2Q8IYT4 538 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 ATPAF2Q8N5M1 289 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 RMDN2Q96LZ7 410 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 RBM15Q96T37 977 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 ACTR5Q9H9F9 607 aaPredicted RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 TSPAN16Q9UKR8 245 aa12.68□□□□□ -0.38
SMAD9-201ENST00000350148 TTC7AQ9ULT0 858 aaPredicted RBP12.68□□□□□ -0.38
SMAD9-201ENST00000350148 TAC1P20366 129 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 IFT88Q13099 833 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 ZNF449Q6P9G9 518 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 LCA5Q86VQ0 697 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 ELOVL4Q9GZR5 314 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 OSGEPQ9NPF4 335 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 EIF4E1BA6NMX2 242 aaKnown RBP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 HSDL1Q3SXM5 330 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 ZC3H18Q86VM9 953 aaKnown RBP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 KIRREL3Q8IZU9 778 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 C18orf25Q96B23 403 aaPredicted RBP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 YIPF3Q9GZM5 350 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 USP18Q9UMW8 372 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 CDY2AQ9Y6F7 541 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 TISP43B9A030 160 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 PARNO95453 639 aaKnown RBP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 MYCP01106 439 aaPredicted RBP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 NCAM1P13591 858 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 CYP3A5P20815 502 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 RECQLP46063 649 aaPredicted RBP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 RAD51Q06609 339 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 UGP2Q16851 508 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 FBXO44Q9H4M3 255 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 OLA1Q9NTK5 396 aaKnown RBP12.67□□□□□ -0.38
SMAD9-201ENST00000350148 CYBBP04839 570 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 PCYT1AP49585 367 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 OLFML2BQ68BL8 750 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 LINC00523Q86TU6 105 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 SHISA4Q96DD7 197 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 TTYH3Q9C0H2 523 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 TFR2Q9UP52 801 aa12.67□□□□□ -0.38
SMAD9-201ENST00000350148 ZNF862O60290 1169 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 DARSP14868 501 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 TNFRSF8P28908 595 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 RAP1GAPP47736 663 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 ALDH1A3P47895 512 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 ZNF235Q14590 738 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 RNF219Q5W0B1 726 aaPredicted RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 SLFN11Q7Z7L1 901 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 TOP6BLQ8N6T0 577 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms