RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ZNF410Q86VK4 478 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 ECHDC2Q86YB7 292 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 TMEM35BQ8NCS4 154 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 DNAJB3Q8WWF6 145 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 HPDLQ96IR7 371 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 MAGEB18Q96M61 343 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 FAM118BQ9BPY3 351 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 PAIP2Q9BPZ3 127 aaKnown RBP22.36■■□□□ 1.17
PTPN18-202ENST00000347849 PITPNM3Q9BZ71 974 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 ETNK1Q9HBU6 452 aa22.36■■□□□ 1.17
PTPN18-202ENST00000347849 TMEM191CA6NGB0 347 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 TREHO43280 583 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 SLC1A1P43005 524 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 SSR1P43307 286 aaKnown RBP22.35■■□□□ 1.17
PTPN18-202ENST00000347849 ZIC5Q96T25 663 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 PCDHGC3Q9UN70 934 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 R3HDM2Q9Y2K5 976 aaKnown RBP22.35■■□□□ 1.17
PTPN18-202ENST00000347849 F8VP50 259 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 CYP2C9P11712 490 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 MFSD10Q14728 455 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 TXNRD3NBQ6F5E7 133 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 KIF12Q96FN5 646 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 SLC24A3Q9HC58 644 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 DPP3Q9NY33 737 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 GJD2Q9UKL4 321 aa22.35■■□□□ 1.17
PTPN18-202ENST00000347849 HTTP42858 3142 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 CCDC189A1A4V9 331 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 LSM8O95777 96 aaKnown RBP22.34■■□□□ 1.17
PTPN18-202ENST00000347849 ATF2P15336 505 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 FOXN2P32314 431 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 IFNL1Q8IU54 200 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 ANKLE1Q8NAG6 615 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 C9orf72Q96LT7 481 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 SCINQ9Y6U3 715 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 NRCAMQ92823 1304 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 MBLAC1A4D2B0 266 aaPredicted RBP22.34■■□□□ 1.17
PTPN18-202ENST00000347849 RRN3P2A6NIE6 340 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 CILPO75339 1184 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 TAC1P20366 129 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 CDH5P33151 784 aaPredicted RBP22.34■■□□□ 1.17
PTPN18-202ENST00000347849 PTK6Q13882 451 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 MTFR1Q15390 333 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 GLRA4Q5JXX5 417 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 CATSPER4Q7RTX7 472 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 ACSF2Q96CM8 615 aaPredicted RBP22.34■■□□□ 1.17
PTPN18-202ENST00000347849 ADPGKQ9BRR6 497 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 TRAIPQ9BWF2 469 aa22.34■■□□□ 1.17
PTPN18-202ENST00000347849 GAS8O95995 478 aa22.33■■□□□ 1.17
PTPN18-202ENST00000347849 MYL3P08590 195 aa22.33■■□□□ 1.17
PTPN18-202ENST00000347849 RALAP11233 206 aa22.33■■□□□ 1.17
PTPN18-202ENST00000347849 ATP2A2P16615 1042 aaKnown RBP22.33■■□□□ 1.17
PTPN18-202ENST00000347849 EIF4BP23588 611 aaKnown RBP22.33■■□□□ 1.17
PTPN18-202ENST00000347849 GRM5P41594 1212 aa22.33■■□□□ 1.17
PTPN18-202ENST00000347849 ADAM17P78536 824 aa22.33■■□□□ 1.17
PTPN18-202ENST00000347849 PPP1R15BQ5SWA1 713 aa22.33■■□□□ 1.17
PTPN18-202ENST00000347849 RNF43Q68DV7 783 aa22.33■■□□□ 1.17
PTPN18-202ENST00000347849 DPH6Q7L8W6 267 aa22.33■■□□□ 1.17
PTPN18-202ENST00000347849 MANSC4A6NHS7 340 aaPredicted RBP22.33■■□□□ 1.16
PTPN18-202ENST00000347849 PI4K2BG5E9Z4 385 aa22.33■■□□□ 1.16
PTPN18-202ENST00000347849 GOLGA8SH3BPF8 625 aa22.33■■□□□ 1.16
PTPN18-202ENST00000347849 DNAJC24Q6P3W2 148 aa22.33■■□□□ 1.16
PTPN18-202ENST00000347849 PRUNE1Q86TP1 453 aa22.33■■□□□ 1.16
PTPN18-202ENST00000347849 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.33■■□□□ 1.16
PTPN18-202ENST00000347849 KCNV2Q8TDN2 545 aa22.33■■□□□ 1.16
PTPN18-202ENST00000347849 SPDL1Q96EA4 605 aa22.33■■□□□ 1.16
PTPN18-202ENST00000347849 CPXM1Q96SM3 734 aa22.33■■□□□ 1.16
PTPN18-202ENST00000347849 NXF3Q9H4D5 531 aaKnown RBP22.33■■□□□ 1.16
PTPN18-202ENST00000347849 CDH16O75309 829 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 UNC5CO95185 931 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 CCNB1P14635 433 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 PTPN11Q06124 597 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-202ENST00000347849 RGMBQ6NW40 437 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 ATL2Q8NHH9 583 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 C18orf25Q96B23 403 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-202ENST00000347849 GCOM2Q9BZD3 368 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-202ENST00000347849 DCLK3Q9C098 648 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 TUBGCP4Q9UGJ1 667 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 ZNF236Q9UL36 1845 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 MYADML2A6NDP7 307 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 RASA4BC9J798 803 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 RASA4O43374 803 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 TCEA3O75764 348 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 CALB1P05937 261 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 AKAP5P24588 427 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 PSEN2P49810 448 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 ANKRD20A2Q5SQ80 823 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 ANKRD20A1Q5TYW2 823 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 ANKRD20A3Q5VUR7 823 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 RHOT1Q8IXI2 618 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 JOSD2Q8TAC2 188 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 TMEM176AQ96HP8 235 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 APOL6Q9BWW8 343 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 VRTNQ9H8Y1 702 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 C2CD2Q9Y426 696 aa22.32■■□□□ 1.16
PTPN18-202ENST00000347849 DARSP14868 501 aaKnown RBP22.31■■□□□ 1.16
PTPN18-202ENST00000347849 RFC1P35251 1148 aaPredicted RBP22.31■■□□□ 1.16
PTPN18-202ENST00000347849 GRK7Q8WTQ7 553 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 SMIM35A0A1B0GVV1 85 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 HAS3O00219 553 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 CYP3A5P20815 502 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms