RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 STXBP5Q5T5C0 1151 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 CCDC186Q7Z3E2 898 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 DNAJB7Q7Z6W7 309 aaPredicted RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 TMC8Q8IU68 726 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 ARHGEF19Q8IW93 802 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 SLC44A3Q8N4M1 653 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 FLCNQ8NFG4 579 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 LMO3Q8TAP4 145 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 ASIC4Q96FT7 647 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 RPP25Q9BUL9 199 aaKnown RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 XYLT2Q9H1B5 865 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 GANQ9H2C0 597 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 DPEP3Q9H4B8 488 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 AVENQ9NQS1 362 aaPredicted RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 GDE1Q9NZC3 331 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 HSFX1Q9UBD0 423 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 FHOD1Q9Y613 1164 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 HELZP42694 1942 aaKnown RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 STK25O00506 426 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 PMM2O15305 246 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 TACC1O75410 805 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 NOL4O94818 638 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 STAU1O95793 577 aaKnown RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 SRFP11831 508 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 P4HA1P13674 534 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 ADKP55263 362 aaKnown RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 CDH8P55286 799 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 RPL10AP62906 217 aaKnown RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 TBX2Q13207 712 aaPredicted RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 ORC1Q13415 861 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 RAPGEF1Q13905 1077 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 TRIM14Q14142 442 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 ARID5BQ14865 1188 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 ARHGAP15Q53QZ3 475 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 WDR44Q5JSH3 913 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 KLHDC7AQ5VTJ3 777 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 RRAGAQ7L523 313 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 CACNA2D4Q7Z3S7 1137 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 SIX5Q8N196 739 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 CCDC150Q8NCX0 1101 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 NXPE3Q969Y0 559 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 NT5C1BQ96P26 610 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 NUP58Q9BVL2 599 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 PLCB1Q9NQ66 1216 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 CRTAC1Q9NQ79 661 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 IMPACTQ9P2X3 320 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 AJAP1Q9UKB5 411 aaPredicted RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 COQ4Q9Y3A0 265 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 COL4A3Q01955 1670 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 MUC6Q6W4X9 2439 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 AKR1B15C9JRZ8 316 aaPredicted RBP14.65□□□□□ -0.06
TPM4-202ENST00000344824 ANHXE9PGG2 379 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 RNF225M0QZC1 329 aaPredicted RBP14.65□□□□□ -0.06
TPM4-202ENST00000344824 MOSPD3O75425 235 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 BDNFP23560 247 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 ANXA13P27216 316 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 EPHA5P54756 1037 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 GRM2Q14416 872 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 MAPRE1Q15691 268 aaKnown RBP14.65□□□□□ -0.06
TPM4-202ENST00000344824 ARHGAP44Q17R89 818 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 SGSM1Q2NKQ1 1148 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 GPR158Q5T848 1215 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 DPY19L2P1Q6NXN4 242 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 PPM1KQ8N3J5 372 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 FBXL6Q8N531 539 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 ZSCAN18Q8TBC5 510 aaPredicted RBP14.65□□□□□ -0.06
TPM4-202ENST00000344824 TATDN2Q93075 761 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 PKMYT1Q99640 499 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 MED10Q9BTT4 135 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 UBE2TQ9NPD8 197 aaPredicted RBP14.65□□□□□ -0.06
TPM4-202ENST00000344824 APEX2Q9UBZ4 518 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 DNAJC12Q9UKB3 198 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 NME7Q9Y5B8 376 aa14.65□□□□□ -0.06
TPM4-202ENST00000344824 MFAP3LO75121 409 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 CSH1P0DML2 217 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 CSH2P0DML3 217 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 UCHL3P15374 230 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 CDC25CP30307 473 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 KRT9P35527 623 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 GRIK1P39086 918 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 NOP14P78316 857 aaKnown RBP14.64□□□□□ -0.07
TPM4-202ENST00000344824 GPC5P78333 572 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 IFRD2Q12894 506 aaPredicted RBP14.64□□□□□ -0.07
TPM4-202ENST00000344824 CFAP221Q4G0U5 840 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 FAM78AQ5JUQ0 283 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 TANGO2Q6ICL3 276 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 PHLDB3Q6NSJ2 640 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 GAREM2Q75VX8 874 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 LIMS2Q7Z4I7 341 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 B3GALNT2Q8NCR0 500 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 KAT5Q92993 513 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 PCED1BQ96HM7 432 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 FUBP3Q96I24 572 aaKnown RBP eCLIP14.64□□□□□ -0.07
TPM4-202ENST00000344824 ZSWIM3Q96MP5 696 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 LRRC3Q9BY71 257 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 TTYH3Q9C0H2 523 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 SDCBP2Q9H190 292 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 APOBEC3GQ9HC16 384 aaKnown RBP14.64□□□□□ -0.07
TPM4-202ENST00000344824 ZFP14Q9HCL3 533 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 ABCB6Q9NP58 842 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms