RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 LRRC6Q86X45 466 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 USP13Q92995 863 aaPredicted RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 TMBIM4Q9HC24 238 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ATPIF1Q9UII2 106 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 PRELID1Q9Y255 219 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 TIMM44O43615 452 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 KHDRBS3O75525 346 aaKnown RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 GSTM1P09488 218 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 PAICSP22234 425 aaKnown RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 PDK1Q15118 436 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 CDK20Q8IZL9 346 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ADSSL1Q8N142 457 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 SCFD2Q8WU76 684 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 SYN2Q92777 582 aaPredicted RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 RSAD1Q9HA92 442 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 MOV10Q9HCE1 1003 aaKnown RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 EHD3Q9NZN3 535 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 DUSP12Q9UNI6 340 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 SPACA6W5XKT8 324 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 GPATCH8Q9UKJ3 1502 aaKnown RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 FANCAO15360 1455 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 SAGE2PA6NJ88 616 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 GCLMP48507 274 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ARHGEF6Q15052 776 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 NEDD8Q15843 81 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 DUOXA2Q1HG44 320 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 CLEC4GQ6UXB4 293 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ARID3BQ8IVW6 561 aaPredicted RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 GPD1LQ8N335 351 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 RERGLQ9H628 205 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 GALNT8Q9NY28 637 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 GDAQ9Y2T3 454 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 FHOD1Q9Y613 1164 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 SHROOM2Q13796 1616 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ATXN8OSP0DMR3 200 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 GTF2H1P32780 548 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 OSTNP61366 133 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 TBCELQ5QJ74 424 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 PDPK2PQ6A1A2 396 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 POLNQ7Z5Q5 900 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 DPP9Q86TI2 863 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 EXOC3L1Q86VI1 746 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 USP38Q8NB14 1042 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 KLHL32Q96NJ5 620 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 EYA1Q99502 592 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 RPS6KB2Q9UBS0 482 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 PHF11Q9UIL8 331 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 A0A087WWV3 80 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 BMP3P12645 472 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 TFE3P19532 575 aaPredicted RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ADD2P35612 726 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 CHRNA2Q15822 529 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 EAPPQ56P03 285 aaPredicted RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 TNFAIP8L3Q5GJ75 292 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ATG14Q6ZNE5 492 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ZNF677Q86XU0 584 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 SPATA18Q8TC71 538 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 C18orf8Q96DM3 657 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 CATSPERBQ9H7T0 1116 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 RBM12Q9NTZ6 932 aaKnown RBP8.63□□□□□ -1.03
MCPH1-201ENST00000344683 MLXQ9UH92 298 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 VPS4BO75351 444 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 AP1G2O75843 785 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 POLR2EP19388 210 aaKnown RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 RPS6KA3P51812 740 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 ABATP80404 500 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 TTLL9Q3SXZ7 439 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 RC3H1Q5TC82 1133 aaKnown RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 JAMLQ86YT9 394 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 LRRC34Q8IZ02 419 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 SAMD3Q8N6K7 520 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 RASGRP4Q8TDF6 673 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 FAM20AQ96MK3 541 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 LBHD1Q9BQE6 289 aaPredicted RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 LATS2Q9NRM7 1088 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 L1RE1Q9UN81 338 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 GSAPA4D1B5 854 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 SERPIND1P05546 499 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 PPP2R1BP30154 601 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 RAP1GAPP47736 663 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 YWHAZP63104 245 aaKnown RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 MAD2L1Q13257 205 aaPredicted RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 PTRHD1Q6GMV3 140 aaKnown RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 CHSY1Q86X52 802 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 TDRD5Q8NAT2 981 aaKnown RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 SLC9A7Q96T83 725 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 TSR3Q9UJK0 312 aaKnown RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 ASAP1Q9ULH1 1129 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 RNF112Q9ULX5 631 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 C2CD2Q9Y426 696 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 ATXN2Q99700 1313 aaKnown RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 FAM47E-STBD1D6RA91 191 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 SFNP31947 248 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 GUCY1A2P33402 732 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 CPA2P48052 419 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 ITGA8P53708 1063 aa8.62□□□□□ -1.03
MCPH1-201ENST00000344683 CRELD2Q6UXH1 353 aaPredicted RBP8.62□□□□□ -1.03
MCPH1-201ENST00000344683 LRRC71Q8N4P6 559 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms