RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RPA3P35244 121 aaPredicted RBP22.43■■□□□ 1.18
CCDC38-201ENST00000344280 C15orf59Q2T9L4 293 aaPredicted RBP22.43■■□□□ 1.18
CCDC38-201ENST00000344280 TAPT1Q6NXT6 567 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 MAMDC4Q6UXC1 1216 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 PARP9Q8IXQ6 854 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 MROH8Q9H579 483 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 PNMA3Q9UL41 463 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 TMEM132DQ14C87 1099 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 GALNTL6Q49A17 601 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 SYCP2LQ5T4T6 812 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 FITM2Q8N6M3 262 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 AFG1LQ8WV93 481 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 THOC1Q96FV9 657 aaKnown RBP22.43■■□□□ 1.18
CCDC38-201ENST00000344280 MAK16Q9BXY0 300 aaKnown RBP22.43■■□□□ 1.18
CCDC38-201ENST00000344280 VRTNQ9H8Y1 702 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 UBN1Q9NPG3 1134 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 RABGEF1Q9UJ41 708 aa22.43■■□□□ 1.18
CCDC38-201ENST00000344280 E5RJQ4 531 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 APOC4-APOC2K7ER74 178 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 APOC2P02655 101 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 OSBPP22059 807 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 GJA5P36382 358 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 EIF3EP60228 445 aaKnown RBP22.42■■□□□ 1.18
CCDC38-201ENST00000344280 MTFR1Q15390 333 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 ZNF484Q5JVG2 852 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 TTC13Q8NBP0 860 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 ASB7Q9H672 318 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 ARL2BPQ9Y2Y0 163 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 RNF8O76064 485 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 HMGCRP04035 888 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 PFKMP08237 780 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 RBP3P10745 1247 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 ELF3P78545 371 aaPredicted RBP22.42■■□□□ 1.18
CCDC38-201ENST00000344280 IL9RQ01113 521 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 TNFAIP2Q03169 654 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 DNAJC3Q13217 504 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 CDO1Q16878 200 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 TBC1D1Q86TI0 1168 aaPredicted RBP22.42■■□□□ 1.18
CCDC38-201ENST00000344280 ANKLE1Q8NAG6 615 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 SPATA18Q8TC71 538 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 PYROXD1Q8WU10 500 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.42■■□□□ 1.18
CCDC38-201ENST00000344280 TSPAN16Q9UKR8 245 aa22.42■■□□□ 1.18
CCDC38-201ENST00000344280 VDRP11473 427 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 ATICP31939 592 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 ZNF143P52747 638 aaPredicted RBP22.41■■□□□ 1.18
CCDC38-201ENST00000344280 NR1H3Q13133 447 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 SLC1A5Q15758 541 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 FAM183BPQ6ZVS7 135 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 ZC3H18Q86VM9 953 aaKnown RBP22.41■■□□□ 1.18
CCDC38-201ENST00000344280 FBXO36Q8NEA4 188 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 NLRP7Q8WX94 980 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 RXFP2Q8WXD0 754 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 CYP3A43Q9HB55 503 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 SLCO1B3Q9NPD5 702 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 BARX2Q9UMQ3 279 aaPredicted RBP22.41■■□□□ 1.18
CCDC38-201ENST00000344280 PRPF4O43172 522 aaKnown RBP eCLIP22.41■■□□□ 1.18
CCDC38-201ENST00000344280 RGS7P49802 495 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 CDH6P55285 790 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 ARL4CP56559 192 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 NCALDP61601 193 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 POU5F1BQ06416 359 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 MKRN3Q13064 507 aaKnown RBP22.41■■□□□ 1.18
CCDC38-201ENST00000344280 EFHC2Q5JST6 749 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 C3orf62Q6ZUJ4 267 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 PCGF5Q86SE9 256 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 IFNLR1Q8IU57 520 aaPredicted RBP22.41■■□□□ 1.18
CCDC38-201ENST00000344280 CCDC63Q8NA47 563 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 SMC6Q96SB8 1091 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 PITPNM3Q9BZ71 974 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 RNF181Q9P0P0 153 aa22.41■■□□□ 1.18
CCDC38-201ENST00000344280 PSMC3IPQ9P2W1 217 aaPredicted RBP22.41■■□□□ 1.18
CCDC38-201ENST00000344280 ZMYND8Q9ULU4 1186 aaPredicted RBP22.41■■□□□ 1.18
CCDC38-201ENST00000344280 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.4■■□□□ 1.18
CCDC38-201ENST00000344280 ASB14A6NK59 587 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 C2CD4BA6NLJ0 364 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 TSPAN1O60635 241 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 FGFR1P11362 822 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 ADCYAP1R1P41586 468 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 KCNJ2P63252 427 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 BASP1P80723 227 aaKnown RBP22.4■■□□□ 1.18
CCDC38-201ENST00000344280 OR6B2Q6IFH4 312 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 IGDCC3Q8IVU1 814 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 C16orf70Q9BSU1 422 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 DPP3Q9NY33 737 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 XPO7Q9UIA9 1087 aaKnown RBP22.4■■□□□ 1.18
CCDC38-201ENST00000344280 TYROBPO43914 113 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 MGRN1O60291 552 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 PDGFRAP16234 1089 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 GEMIN4P57678 1058 aaKnown RBP22.4■■□□□ 1.18
CCDC38-201ENST00000344280 INCA1Q0VD86 236 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 LAMC2Q13753 1193 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 BBS9Q3SYG4 887 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 ECHDC2Q86YB7 292 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 FBF1Q8TES7 1133 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 FAXDC2Q96IV6 333 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 ECT2Q9H8V3 914 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 ASNSD1Q9NWL6 643 aa22.4■■□□□ 1.18
CCDC38-201ENST00000344280 PPEF2O14830 753 aa22.39■■□□□ 1.17
CCDC38-201ENST00000344280 MCF2LO15068 1137 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms