RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 PAPSS1O43252 624 aaPredicted RBP23.17■■□□□ 1.3
CACNB1-201ENST00000344140 TUBBP07437 444 aa23.17■■□□□ 1.3
CACNB1-201ENST00000344140 SSR1P43307 286 aaKnown RBP23.17■■□□□ 1.3
CACNB1-201ENST00000344140 GATMP50440 423 aa23.17■■□□□ 1.3
CACNB1-201ENST00000344140 TSPY1Q01534 308 aa23.17■■□□□ 1.3
CACNB1-201ENST00000344140 LONRF2Q1L5Z9 754 aa23.17■■□□□ 1.3
CACNB1-201ENST00000344140 FAM35AQ86V20 835 aa23.17■■□□□ 1.3
CACNB1-201ENST00000344140 LRRC43Q8N309 656 aa23.17■■□□□ 1.3
CACNB1-201ENST00000344140 KCTD13Q8WZ19 329 aa23.17■■□□□ 1.3
CACNB1-201ENST00000344140 KRT82Q9NSB4 513 aa23.17■■□□□ 1.3
CACNB1-201ENST00000344140 ABHD14A-ACY1A0A1B0GW23 586 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 CCDC188H7C350 402 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 KRIT1O00522 736 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 NRP1O14786 923 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 SYN3O14994 580 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 PYGMP11217 842 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 ZNF143P52747 638 aaPredicted RBP23.16■■□□□ 1.3
CACNB1-201ENST00000344140 CCDC142Q17RM4 750 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 CLEC20AQ6ZU45 233 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 PIGZQ86VD9 579 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 SCUBE3Q8IX30 993 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 KATNAL2Q8IYT4 538 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 ADAM28Q9UKQ2 775 aa23.16■■□□□ 1.3
CACNB1-201ENST00000344140 TSC2P49815 1807 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 GABBR2O75899 941 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 OAZ2O95190 189 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 RHOXF2BP0C7M4 288 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 TAS2R40P59535 323 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 EMC1Q8N766 993 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 VWCEQ96DN2 955 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 SMARCD1Q96GM5 515 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 RHOXF2Q9BQY4 288 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 ANKZF1Q9H8Y5 726 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 ASNSD1Q9NWL6 643 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 FAN1Q9Y2M0 1017 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 TARSL2A2RTX5 802 aaKnown RBP23.15■■□□□ 1.3
CACNB1-201ENST00000344140 C2CD4BA6NLJ0 364 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 AP1G2O75843 785 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 GPD1P21695 349 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 GLE1Q53GS7 698 aaKnown RBP23.15■■□□□ 1.3
CACNB1-201ENST00000344140 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.15■■□□□ 1.3
CACNB1-201ENST00000344140 ARCQ7LC44 396 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 PKMYT1Q99640 499 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 CNPY3Q9BT09 278 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 HTATIP2Q9BUP3 242 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 UBXN6Q9BZV1 441 aa23.15■■□□□ 1.3
CACNB1-201ENST00000344140 PRDM5Q9NQX1 630 aaPredicted RBP23.15■■□□□ 1.3
CACNB1-201ENST00000344140 MICAL3Q7RTP6 2002 aa23.14■■□□□ 1.3
CACNB1-201ENST00000344140 GOLGA6L10A0A0M3HER8 536 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 TRIM43BA6NCK2 446 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 EFCAB14O75071 495 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 LCP1P13796 627 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 RAG1P15918 1043 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 DESP17661 470 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 PPP2R5EQ16537 467 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 DAB2IPQ5VWQ8 1189 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 SLC26A9Q7LBE3 791 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 OR10T2Q8NGX3 314 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 MYLPFQ96A32 169 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 TRIM43Q96BQ3 446 aaPredicted RBP23.14■■□□□ 1.29
CACNB1-201ENST00000344140 LRRC4Q9HBW1 653 aa23.14■■□□□ 1.29
CACNB1-201ENST00000344140 RNF8O76064 485 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 PDGFRAP16234 1089 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 SLC11A1P49279 550 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 ELAVL2Q12926 359 aaKnown RBP23.13■■□□□ 1.29
CACNB1-201ENST00000344140 HADHQ16836 314 aaKnown RBP23.13■■□□□ 1.29
CACNB1-201ENST00000344140 POLNQ7Z5Q5 900 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 TMEM199Q8N511 208 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 EXD1Q8NHP7 514 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 PIWIL1Q96J94 861 aaKnown RBP23.13■■□□□ 1.29
CACNB1-201ENST00000344140 AP1M1Q9BXS5 423 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 PARD6BQ9BYG5 372 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 EPC1Q9H2F5 836 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 DPYSL4O14531 572 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 ZRANB2O95218 330 aaKnown RBP eCLIP23.13■■□□□ 1.29
CACNB1-201ENST00000344140 MAP3K7CLP57077 242 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 EFHC1Q5JVL4 640 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 MFSD5Q6N075 450 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 SLC13A5Q86YT5 568 aaPredicted RBP23.13■■□□□ 1.29
CACNB1-201ENST00000344140 RXFP2Q8WXD0 754 aa23.13■■□□□ 1.29
CACNB1-201ENST00000344140 ARGLU1Q9NWB6 273 aaPredicted RBP23.13■■□□□ 1.29
CACNB1-201ENST00000344140 DDX56Q9NY93 547 aaKnown RBP23.13■■□□□ 1.29
CACNB1-201ENST00000344140 SF3B1O75533 1304 aaKnown RBP eCLIP23.12■■□□□ 1.294e-7■■■■■ 133.7
CACNB1-201ENST00000344140 LRCH4O75427 683 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 BEST1O76090 585 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 GALTP07902 379 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 KRT7P08729 469 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 PCK1P35558 622 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 FLT3P36888 993 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 CETN2P41208 172 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 C8orf74Q6P047 294 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 AADACL2Q6P093 401 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 C4orf50Q6ZRC1 276 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 KHSRPQ92945 711 aaKnown RBP eCLIP23.12■■□□□ 1.29
CACNB1-201ENST00000344140 SMOQ99835 787 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 NCAPGQ9BPX3 1015 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 CSNK1G1Q9HCP0 422 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 MTUS1Q9ULD2 1270 aa23.12■■□□□ 1.29
CACNB1-201ENST00000344140 DGKIO75912 1065 aa23.11■■□□□ 1.29
CACNB1-201ENST00000344140 FBXO21O94952 628 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms