RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 CHD6Q8TD26 2715 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 UBE4BO95155 1302 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 C2orf78A6NCI8 922 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 SLC9A3R1O14745 358 aaPredicted RBP13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 TACC1O75410 805 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 RHOBTB1O94844 696 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 EPN2O95208 641 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 YEATS4O95619 227 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 APBB3O95704 486 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 RAP1GAPP47736 663 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 USP4Q13107 963 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 ELF2Q15723 593 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 PPM1JQ5JR12 505 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 TDRD10Q5VZ19 366 aaKnown RBP13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 CNNM4Q6P4Q7 775 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 PKN3Q6P5Z2 889 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 KBTBD6Q86V97 674 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 KIAA1958Q8N8K9 716 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 XXYLT1Q8NBI6 393 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 KBTBD7Q8WVZ9 684 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 ZC3H10Q96K80 434 aaKnown RBP13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 C7orf25Q9BPX7 421 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 FBRSL1Q9HCM7 1045 aaKnown RBP13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 CRTAC1Q9NQ79 661 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 EML5Q05BV3 1969 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 CFAP47Q6ZTR5 3102 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 HCRTO43612 131 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 PHACTR2O75167 634 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 ABL1P00519 1130 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 ADRB1P08588 477 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 PTPN1P18031 435 aaKnown RBP13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 CYP2J2P51589 502 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 LIMK1P53667 647 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 NOP14P78316 857 aaKnown RBP13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 DMC1Q14565 340 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 PSMD6Q15008 389 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 E2F4Q16254 413 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 SCARA3Q6AZY7 606 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 UNC13DQ70J99 1090 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 C11orf74Q86VG3 221 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 RIN3Q8TB24 985 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 HPS3Q969F9 1004 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 SYAP1Q96A49 352 aaPredicted RBP13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 CCDC127Q96BQ5 260 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 PCED1BQ96HM7 432 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 FAM84AQ96KN4 292 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 C8orf48Q96LL4 319 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 CGRRF1Q99675 332 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 LINC00597Q9H2U6 94 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 AGPAT3Q9NRZ7 376 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 FAM13BQ9NYF5 915 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 EBF1Q9UH73 591 aa13.93□□□□□ -0.18
NECTIN1-203ENST00000341398 MYH10P35580 1976 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 PTPRJQ12913 1337 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 CLIC2O15247 247 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 GDF9O60383 454 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 CST3P01034 146 aaPredicted RBP13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 ATICP31939 592 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 CYP24A1Q07973 514 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 USP39Q53GS9 565 aaKnown RBP13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 MDH1BQ5I0G3 518 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 EPM2AIP1Q7L775 607 aaPredicted RBP13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 GLIS3Q8NEA6 775 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 CNTNAP3BQ96NU0 1288 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 HHIPQ96QV1 700 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 TTLL2Q9BWV7 592 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 CNTNAP3Q9BZ76 1288 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 ELOVL4Q9GZR5 314 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 VPS45Q9NRW7 570 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 MYO16Q9Y6X6 1858 aa13.92□□□□□ -0.18
NECTIN1-203ENST00000341398 ATP8B3O60423 1300 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 PVALEFA0A1B0GWK0 134 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 ZNF840PA6NDX5 716 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 A8MXQ7 604 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 F8VP50 259 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 LEFTY2O00292 366 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 POLR2DO15514 142 aaKnown RBP13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 TGFB1I1O43294 461 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 CLSTN1O94985 981 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 RTN3O95197 1032 aaPredicted RBP13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 STAU1O95793 577 aaKnown RBP13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 HSP90AA1P07900 732 aaKnown RBP13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 KCNA4P22459 653 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 HOXD13P35453 343 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 DGKEP52429 567 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 AP3M2P53677 418 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 SLC7A9P82251 487 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 SF3A2Q15428 464 aaKnown RBP13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 PLK5Q496M5 336 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 PDZD8Q8NEN9 1154 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 TSTD1Q8NFU3 115 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 GOLGA5Q8TBA6 731 aa13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 MRPL45Q9BRJ2 306 aaKnown RBP13.91□□□□□ -0.18
NECTIN1-203ENST00000341398 TBC1D14Q9P2M4 693 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms