RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 NRBP2Q9NSY0 501 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 MARK1Q9P0L2 795 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 CALCOCO1Q9P1Z2 691 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 YIPF1Q9Y548 306 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 PCDHA10Q9Y5I2 948 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 MED13Q9UHV7 2174 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 ANKHD1Q8IWZ3 2542 aaKnown RBP12.29□□□□□ -0.44
ATXN3-201ENST00000340660 TMEM150BA6NC51 233 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 M0R2N6 131 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 PTGESO14684 152 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 ADAM23O75077 832 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 RNF224P0DH78 156 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 DNM2P50570 870 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 CYP4F8P98187 520 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
ATXN3-201ENST00000340660 TMEM132AQ24JP5 1023 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 TPGS2Q68CL5 300 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 CHSY3Q70JA7 882 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 ITPRIPQ8IWB1 547 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 SIRT2Q8IXJ6 389 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 ENGASEQ8NFI3 743 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 SPATA20Q8TB22 786 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 CXCL16Q9H2A7 254 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 RNF41Q9H4P4 317 aaPredicted RBP12.29□□□□□ -0.44
ATXN3-201ENST00000340660 GPC6Q9Y625 555 aaPredicted RBP12.29□□□□□ -0.44
ATXN3-201ENST00000340660 WNT6Q9Y6F9 365 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 APCP25054 2843 aa12.29□□□□□ -0.44
ATXN3-201ENST00000340660 TSPAN1O60635 241 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 DIAPH2O60879 1101 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 PSMA6P60900 246 aaKnown RBP12.28□□□□□ -0.44
ATXN3-201ENST00000340660 MRPS21P82921 87 aaKnown RBP12.28□□□□□ -0.44
ATXN3-201ENST00000340660 ARL13BQ3SXY8 428 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 MTERF2Q49AM1 385 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 SYCP2LQ5T4T6 812 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 IFIT1BQ5T764 474 aaKnown RBP12.28□□□□□ -0.44
ATXN3-201ENST00000340660 C1QL3Q5VWW1 255 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 CCDC81Q6ZN84 652 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 SRGAP1Q7Z6B7 1085 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 SMAP1Q8IYB5 467 aaPredicted RBP12.28□□□□□ -0.44
ATXN3-201ENST00000340660 CPA6Q8N4T0 437 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 GLMNQ92990 594 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 TASP1Q9H6P5 420 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 ZDHHC4Q9NPG8 344 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 CD93Q9NPY3 652 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 ZSWIM5Q9P217 1185 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 KNL1Q8NG31 2342 aa12.28□□□□□ -0.44
ATXN3-201ENST00000340660 WIPF3A6NGB9 483 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 ENC1O14682 589 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 GNB5O14775 395 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 RLBP1P12271 317 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 GABRG2P18507 467 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 GLDCP23378 1020 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 GABRR2P28476 465 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 BRCC3P46736 316 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 ACADVLP49748 655 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 WDR45BQ5MNZ6 344 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 NOTUMQ6P988 496 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 PTRH1Q86Y79 214 aaKnown RBP12.27□□□□□ -0.45
ATXN3-201ENST00000340660 MMP21Q8N119 569 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 DNASE2BQ8WZ79 361 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 PGBD1Q96JS3 809 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 SLC46A2Q9BY10 475 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 PARP2Q9UGN5 583 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 AFF4Q9UHB7 1163 aaKnown RBP12.27□□□□□ -0.45
ATXN3-201ENST00000340660 FBXL5Q9UKA1 691 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 CYP8B1Q9UNU6 501 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 PLAAQ9Y263 795 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 PCDHB1Q9Y5F3 818 aa12.27□□□□□ -0.45
ATXN3-201ENST00000340660 VPS37CA5D8V6 355 aaPredicted RBP12.26□□□□□ -0.45
ATXN3-201ENST00000340660 TMEM189-UBE2V1I3L0A0 370 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 PPFIA2O75334 1257 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 VNN2O95498 520 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 MPOP05164 745 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 C1SP09871 688 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 CDK4P11802 303 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 OPRD1P41143 372 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 NCAPHQ15003 741 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 PDGFRLQ15198 375 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 ARHGAP15Q53QZ3 475 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 EMC10Q5UCC4 262 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 DCBLD1Q8N8Z6 715 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 C3orf58Q8NDZ4 430 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 USP13Q92995 863 aaPredicted RBP12.26□□□□□ -0.45
ATXN3-201ENST00000340660 CCDC51Q96ER9 411 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 VCPIP1Q96JH7 1222 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 FAM20AQ96MK3 541 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 COL4A3BPQ9Y5P4 624 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 MED13LQ71F56 2210 aa12.26□□□□□ -0.45
ATXN3-201ENST00000340660 A0A1B0GVT2 93 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 SFI1A8K8P3 1242 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 PCDHGA12O60330 932 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 B3GAT3O94766 335 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 SFTPCP11686 197 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 ERVPABLB-1P60509 514 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 MESP2Q0VG99 397 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 SEC23AQ15436 765 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 HACE1Q8IYU2 909 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 CACTIN-AS1Q8N1I8 211 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms