RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 DHTKD1Q96HY7 919 aaPredicted RBP14.19□□□□□ -0.14
SIRPB3P-201ENST00000340424 TTLL2Q9BWV7 592 aa14.19□□□□□ -0.14
SIRPB3P-201ENST00000340424 TDP1Q9NUW8 608 aa14.19□□□□□ -0.14
SIRPB3P-201ENST00000340424 CHMP5Q9NZZ3 219 aa14.19□□□□□ -0.14
SIRPB3P-201ENST00000340424 PIAS3Q9Y6X2 628 aa14.19□□□□□ -0.14
SIRPB3P-201ENST00000340424 OBSL1O75147 1896 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 NCANO14594 1321 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 TRAV19A0A0A6YYK7 116 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 PROB1E7EW31 1015 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 F8VP50 259 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 H0Y858 1186 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 TADA3O75528 432 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 DCNP07585 359 aaKnown RBP14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 USP17L7P0C7H9 530 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 TRIM49P0CI25 452 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 TRIM49CP0CI26 452 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 NBL1P41271 181 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 ASPAP45381 313 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 GCLMP48507 274 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 CDH8P55286 799 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 PPP3CAQ08209 521 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 INCA1Q0VD86 236 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 SCARA5Q6ZMJ2 495 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 C1orf210Q8IVY1 113 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 CRYBG2Q8N1P7 616 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 SMARCD1Q96GM5 515 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 NIF3L1Q9GZT8 377 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 DPEP3Q9H4B8 488 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 TRPM5Q9NZQ8 1165 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 NME7Q9Y5B8 376 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 USP34Q70CQ2 3546 aa14.18□□□□□ -0.14
SIRPB3P-201ENST00000340424 TICRRQ7Z2Z1 1910 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 KIF26AQ9ULI4 1882 aaPredicted RBP14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 RTN3O95197 1032 aaPredicted RBP14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 TCF3P15923 654 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 CCNE1P24864 410 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 RAP1GAPP47736 663 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 MXI1P50539 228 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 UBE2HP62256 183 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 TXNDC8Q6A555 127 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 CC2D1AQ6P1N0 951 aaPredicted RBP14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 RALGPS2Q86X27 583 aaPredicted RBP14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 KIAA1958Q8N8K9 716 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 FBXL13Q8NEE6 735 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 PDZD8Q8NEN9 1154 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 TAS1R2Q8TE23 839 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 OVCA2Q8WZ82 227 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 FAM3CQ92520 227 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 CEP63Q96MT8 703 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 SLITRK1Q96PX8 696 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 B3GNT5Q9BYG0 378 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 ZNF518BQ9C0D4 1074 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 SDCBP2Q9H190 292 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 METTL14Q9HCE5 456 aaKnown RBP14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 DMAP1Q9NPF5 467 aaPredicted RBP14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 WDR70Q9NW82 654 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 COMMD8Q9NX08 183 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 GREB1Q4ZG55 1949 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 DMDP11532 3685 aa14.17□□□□□ -0.14
SIRPB3P-201ENST00000340424 BICDL2A1A5D9 508 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 CKMP06732 381 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 MRE11P49959 708 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 KPNA1P52294 538 aaPredicted RBP14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 NDST1P52848 882 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 AMPD2Q01433 879 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 PDGFRLQ15198 375 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 ANKRD40Q6AI12 368 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 ZC3H14Q6PJT7 736 aaKnown RBP14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 MAMSTRQ6ZN01 415 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 FAM35AQ86V20 835 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 NUP93Q8N1F7 819 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 STKLD1Q8NE28 680 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 USP13Q92995 863 aaPredicted RBP14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 EXOC4Q96A65 974 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 LRRC3BQ96PB8 259 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 MED10Q9BTT4 135 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 NT5C1AQ9BXI3 368 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 TMEM121BQ9BXQ6 578 aaPredicted RBP14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 ARMCX3Q9UH62 379 aaPredicted RBP14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 MAN1B1Q9UKM7 699 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 FBXO4Q9UKT5 387 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 VPS13AQ96RL7 3174 aa14.16□□□□□ -0.14
SIRPB3P-201ENST00000340424 CD72P21854 359 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 YWHAQP27348 245 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 LRRC32Q14392 662 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 ITPRIPL2Q3MIP1 535 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 ZNF528Q3MIS6 628 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 WDR44Q5JSH3 913 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 SPOPLQ6IQ16 392 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 ACOT1Q86TX2 421 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 FUKQ8N0W3 1084 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 ZNF687Q8N1G0 1237 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 TRIML1Q8N9V2 468 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 ERCC4Q92889 916 aaPredicted RBP14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 FAM83CQ9BQN1 747 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 SEMA4AQ9H3S1 761 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 APOBEC3GQ9HC16 384 aaKnown RBP14.15□□□□□ -0.14
SIRPB3P-201ENST00000340424 CSNK1G1Q9HCP0 422 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms