RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 SYNCQ9H7C4 482 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 ST7Q9NRC1 585 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 TBC1D13Q9NVG8 400 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 DDX56Q9NY93 547 aaKnown RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 VPS18Q9P253 973 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 UBQLN1Q9UMX0 589 aaKnown RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 PPEF2O14830 753 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 DAPK3O43293 454 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 COILP38432 576 aaPredicted RBP16■□□□□ 0.15
TUBB4B-201ENST00000340384 GGCXP38435 758 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 CDH8P55286 799 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 SNX16P57768 344 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 ZNF268Q14587 947 aaPredicted RBP16■□□□□ 0.15
TUBB4B-201ENST00000340384 C2CD6Q53TS8 623 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 NOMO2Q5JPE7 1267 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 SPDYCQ5MJ68 293 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 DENND1BQ6P3S1 775 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 GLB1LQ6UWU2 654 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 CCDC105Q8IYK2 499 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 RCOR2Q8IZ40 523 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 IPO4Q8TEX9 1081 aaKnown RBP16■□□□□ 0.15
TUBB4B-201ENST00000340384 SLCO2A1Q92959 643 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 C18orf8Q96DM3 657 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 HEXIM2Q96MH2 286 aaKnown RBP16■□□□□ 0.15
TUBB4B-201ENST00000340384 SDCBP2Q9H190 292 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 LRFN2Q9ULH4 789 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 WDR3Q9UNX4 943 aaKnown RBP eCLIP16■□□□□ 0.15
TUBB4B-201ENST00000340384 USTQ9Y2C2 406 aa16■□□□□ 0.15
TUBB4B-201ENST00000340384 TCRBV5S1A1TA0A578 114 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 GJB5O95377 273 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 ECEL1O95672 775 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 THP07101 528 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 PNPLA4P41247 253 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 COPS2P61201 443 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 HTRA4P83105 476 aaPredicted RBP15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 DSC1Q08554 894 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 DUPD1Q68J44 220 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 AADACL2Q6P093 401 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 FNIP1Q8TF40 1166 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 EXOC4Q96A65 974 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 ZNF560Q96MR9 790 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 MCEEQ96PE7 176 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 TRIM7Q9C029 511 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 ELOVL4Q9GZR5 314 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 NR2E1Q9Y466 385 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 SLC4A7Q9Y6M7 1214 aa15.99■□□□□ 0.15
TUBB4B-201ENST00000340384 SIGLEC16A6NMB1 481 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 TBKBP1A7MCY6 615 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 GRXCR1A8MXD5 290 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 RNF40O75150 1001 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 MICAL2O94851 1124 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 SYF2O95926 243 aaKnown RBP15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 FAM153BP0C7A2 387 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 LINC00271P0C7V0 271 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 RARAP10276 462 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 PTGIRP43119 386 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 FAM153CQ494X1 144 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 PPP1R15BQ5SWA1 713 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 CD300LGQ6UXG3 332 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 LRIG3Q6UXM1 1119 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 HERC6Q8IVU3 1022 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 WDTC1Q8N5D0 677 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 FMO2Q99518 471 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 TRIM51Q9BSJ1 452 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 DPH5Q9H2P9 285 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 DNAJB4Q9UDY4 337 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 MTRF1LQ9UGC7 380 aaKnown RBP15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 FAM153AQ9UHL3 310 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 FAN1Q9Y2M0 1017 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 FNDC1Q4ZHG4 1894 aaPredicted RBP15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 CHD9Q3L8U1 2897 aa15.98■□□□□ 0.15
TUBB4B-201ENST00000340384 F8W810 466 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 M0QYV0 167 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 GAS8O95995 478 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 SETSIPP0DME0 302 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 KRT3P12035 628 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 CYP3A5P20815 502 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 ECHS1P30084 290 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 NDST1P52848 882 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 PSMC1P62191 440 aaKnown RBP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 GRIK3Q13003 919 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 ACAP1Q15027 740 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 SIX1Q15475 284 aaPredicted RBP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 HADHQ16836 314 aaKnown RBP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 PTPN20Q4JDL3 420 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 PAN2Q504Q3 1202 aaKnown RBP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 LLGL2Q6P1M3 1020 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 UNC93AQ86WB7 457 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 CPNE8Q86YQ8 564 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 COLGALT2Q8IYK4 626 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 TSEN2Q8NCE0 465 aaKnown RBP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 PHOSPHO2Q8TCD6 241 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 UBE2OQ9C0C9 1292 aaKnown RBP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 CWH43Q9H720 699 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 NRDE2Q9H7Z3 1164 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 PSD3Q9NYI0 1048 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 PDE4DIPQ5VU43 2346 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 GOLGA6L10A6NI86 522 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms