RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 HK2P52789 917 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 EPS8Q12929 822 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 BNC2Q6ZN30 1099 aaPredicted RBP13.27□□□□□ -0.28
USP47-202ENST00000339865 C18orf8Q96DM3 657 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 KIF12Q96FN5 646 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 SPACA7Q96KW9 195 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 MCEEQ96PE7 176 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 RNF181Q9P0P0 153 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 ADGRG1Q9Y653 693 aa13.27□□□□□ -0.28
USP47-202ENST00000339865 VWA5AO00534 786 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 MSH3P20585 1137 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 PURAQ00577 322 aaKnown RBP13.27□□□□□ -0.29
USP47-202ENST00000339865 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 ABRAXAS1Q6UWZ7 409 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 ZIM3Q96PE6 472 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 BDH2Q9BUT1 245 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 PUS7LQ9H0K6 701 aaKnown RBP13.27□□□□□ -0.29
USP47-202ENST00000339865 DSN1Q9H410 356 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 GOLPH3Q9H4A6 298 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 SH3BP4Q9P0V3 963 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 ZNF879B4DU55 563 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 TSPAN4O14817 238 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 THRAP10827 490 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 ITIH2P19823 946 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 GMFBP60983 142 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 DGCR6Q14129 220 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 PLCL1Q15111 1095 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 BARGINQ6ZT62 677 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 EAF2Q96CJ1 260 aaPredicted RBP13.27□□□□□ -0.29
USP47-202ENST00000339865 GNG14A0A1W2PPG7 69 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 POTEMA6NI47 508 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 HMBSP08397 361 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 MTF1Q14872 753 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 RASSF5Q8WWW0 418 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 RMND5AQ9H871 391 aa13.27□□□□□ -0.29
USP47-202ENST00000339865 MYL12BO14950 172 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 CYBBP04839 570 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PDHBP11177 359 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 MAGEA4P43358 317 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 CASP5P51878 434 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 RAB2AP61019 212 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 NFYCQ13952 458 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 KBTBD12Q3ZCT8 623 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 RC3H1Q5TC82 1133 aaKnown RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 AGAP9Q5VTM2 703 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 HPS6Q86YV9 775 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 ZNF713Q8N859 430 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 ZFRQ96KR1 1074 aaKnown RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 FAM111AQ96PZ2 611 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 CCDC28BQ9BUN5 200 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 ABCB10Q9NRK6 738 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 EURLQ9NYK6 297 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PHTF1Q9UMS5 762 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 A0A0X1KG70 313 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PYDC2Q56P42 97 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 TMEM26Q6ZUK4 368 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 ZNF438Q7Z4V0 828 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 DSG4Q86SJ6 1040 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 CDK20Q8IZL9 346 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 RHOBTB2Q9BYZ6 727 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 BHLHE41Q9C0J9 482 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 INPP4BO15327 924 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 KLHL41O60662 606 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 HSF2Q03933 536 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 RESTQ13127 1097 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PTGISQ16647 500 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 TIGD7Q6NT04 549 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 DENND1BQ6P3S1 775 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 ISLR2Q6UXK2 745 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 LRIG3Q6UXM1 1119 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 MSANTD1Q6ZTZ1 278 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 RIBC1Q8N443 379 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 MMGT1Q8N4V1 131 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 ING4Q9UNL4 249 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 RUVBL2Q9Y230 463 aaKnown RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 PNMA6FA0A0J9YX94 578 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 FASP25445 335 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 COASYQ13057 564 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 POLD3Q15054 466 aaPredicted RBP13.26□□□□□ -0.29
USP47-202ENST00000339865 FAM228AQ86W67 206 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 GAL3ST3Q96A11 431 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 SGF29Q96ES7 293 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 CMTM6Q9NX76 183 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 STX11O75558 287 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 STAT5AP42229 794 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 STAT5BP51692 787 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 UGT3A1Q6NUS8 523 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 FAM136AQ96C01 138 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 IGFLR1Q9H665 355 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 LGR6Q9HBX8 967 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 FAM92AA1XBS5 289 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
USP47-202ENST00000339865 PCNAP12004 261 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms