RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PPIL6Q8IXY8 311 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 UBA3Q8TBC4 463 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 ACSS2Q9NR19 701 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 LRRC42Q9Y546 428 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 A0A1B0GVG6 124 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 TOM1L1O75674 476 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 PSMG1O95456 288 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 ABHD2P08910 425 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 OASLQ15646 514 aaKnown RBP16.87■□□□□ 0.29
SCARB1-202ENST00000339570 CFAP157Q5JU67 520 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.87■□□□□ 0.29
SCARB1-202ENST00000339570 LRRC71Q8N4P6 559 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 JPH1Q9HDC5 661 aaPredicted RBP16.87■□□□□ 0.29
SCARB1-202ENST00000339570 G3BP2Q9UN86 482 aaKnown RBP16.87■□□□□ 0.29
SCARB1-202ENST00000339570 TCRBV9S1A1TA0A576 114 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 SORBS2O94875 1100 aaKnown RBP16.86■□□□□ 0.29
SCARB1-202ENST00000339570 APRTP07741 180 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 ASNSP08243 561 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 CHI3L2Q15782 390 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 CTC1Q2NKJ3 1217 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 ARMC3Q5W041 872 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 KBTBD2Q8IY47 623 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 TMEM35BQ8NCS4 154 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 FBXO41Q8TF61 875 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 PPP1R36Q96LQ0 422 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 ASCC2Q9H1I8 757 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-202ENST00000339570 ANKEF1Q9NU02 776 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 ZNRF3Q9ULT6 936 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 CXorf49A8MYA2 514 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-202ENST00000339570 TXNDC9O14530 226 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 STK10O94804 968 aaKnown RBP16.86■□□□□ 0.29
SCARB1-202ENST00000339570 ITGBL1O95965 494 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-202ENST00000339570 C16orf46Q6P387 395 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 RSPH3Q86UC2 560 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 TREML1Q86YW5 311 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 TEX9Q8N6V9 391 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 ZNF333Q96JL9 665 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 FBXL18Q96ME1 805 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 PCDH9Q9HC56 1237 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 IL1RAPL1Q9NZN1 696 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 SCOCQ9UIL1 159 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 A6NHS1 94 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 DGAT1O75907 488 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 ATXN3P54252 364 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-202ENST00000339570 CACNA2D1P54289 1103 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 AQP5P55064 265 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 EFHC2Q5JST6 749 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-202ENST00000339570 DCAKDQ8WVC6 231 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 OXNAD1Q96HP4 312 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-202ENST00000339570 APOL6Q9BWW8 343 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 RNF19AQ9NV58 838 aa16.86■□□□□ 0.29
SCARB1-202ENST00000339570 MAP3K7O43318 606 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 ZMPSTE24O75844 475 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 EGFRP00533 1210 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 CDH6P55285 790 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 CRADDP78560 199 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 ZNF200P98182 395 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PSMD6Q15008 389 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 C15orf59Q2T9L4 293 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PTPN20Q4JDL3 420 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PPP6R3Q5H9R7 873 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PPP1R15BQ5SWA1 713 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 C1orf146Q5VVC0 180 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 CASC4Q6P4E1 433 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 ZNF677Q86XU0 584 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 BANPQ8N9N5 519 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 SRPK1Q96SB4 655 aaKnown RBP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 MAGEB2O15479 319 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 LRCH4O75427 683 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PSAPP07602 524 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 WASHC2DQ5SRD0 308 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 IZUMO2Q6UXV1 221 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.85■□□□□ 0.291e-7■□□□□ 8.9
SCARB1-202ENST00000339570 WDTC1Q8N5D0 677 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PYDC1Q8WXC3 89 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 ATXN7L3BQ96GX2 97 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 SENP1Q9P0U3 644 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 SHOC2Q9UQ13 582 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 LOC100653049A0A140TA62 436 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 I3L4J1 428 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 MCF2LO15068 1137 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 LYPLA1O75608 230 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 KRT34O76011 436 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PDE5AO76074 875 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 APBA3O96018 575 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 SKIP12755 728 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 GARTP22102 1010 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 RGS7P49802 495 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PAPOLAP51003 745 aaKnown RBP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 CDK16Q00536 496 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 RASIP1Q5U651 963 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 POLNQ7Z5Q5 900 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PHF13Q86YI8 300 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 UNC5BQ8IZJ1 945 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCARB1-202ENST00000339570 PGLYRP2Q96PD5 576 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 EBF4Q9BQW3 602 aa16.85■□□□□ 0.29
SCARB1-202ENST00000339570 SLC24A2Q9UI40 661 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms