RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 EZH1Q92800 747 aaPredicted RBP16.73■□□□□ 0.27
LINC01116-202ENST00000339037 ANKRD36BP1Q96IX9 119 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 FGFBP2Q9BYJ0 223 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 DUSP15Q9H1R2 295 aaPredicted RBP16.73■□□□□ 0.27
LINC01116-202ENST00000339037 PCIF1Q9H4Z3 704 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 GCNT4Q9P109 453 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 EBF1Q9UH73 591 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 ARHGAP26Q9UNA1 814 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 FRMD3A2A2Y4 597 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 NFATC1O95644 943 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 HDCP19113 662 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 PMLP29590 882 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 PSMC1P62191 440 aaKnown RBP16.72■□□□□ 0.27
LINC01116-202ENST00000339037 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
LINC01116-202ENST00000339037 N4BP2L1Q5TBK1 243 aaPredicted RBP16.72■□□□□ 0.27
LINC01116-202ENST00000339037 LMBRD2Q68DH5 695 aaPredicted RBP16.72■□□□□ 0.27
LINC01116-202ENST00000339037 RNF43Q68DV7 783 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 TCEAL6Q6IPX3 200 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 FAM171BQ6P995 826 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 VSTM1Q6UX27 236 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 DPH6Q7L8W6 267 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 GPD1LQ8N335 351 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 KBTBD7Q8WVZ9 684 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 TCEAL3Q969E4 200 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 HPDLQ96IR7 371 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 SYT15Q9BQS2 421 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 PANK4Q9NVE7 773 aa16.72■□□□□ 0.27
LINC01116-202ENST00000339037 WDFY3Q8IZQ1 3526 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 SPEGQ15772 3267 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 DCLK1O15075 740 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 KIAA0391O15091 583 aaKnown RBP16.71■□□□□ 0.27
LINC01116-202ENST00000339037 ATP2C2O75185 946 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 RHOBTB1O94844 696 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 TNNC2P02585 160 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 TCF3P15923 654 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 GBP1P32455 592 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 CREB5Q02930 508 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 MAPRE1Q15691 268 aaKnown RBP16.71■□□□□ 0.27
LINC01116-202ENST00000339037 TSTD1Q8NFU3 115 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 MYLPFQ96A32 169 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 SPATA17Q96L03 361 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 CEP295NLQ96MC4 621 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 LSM14BQ9BX40 385 aaKnown RBP16.71■□□□□ 0.27
LINC01116-202ENST00000339037 PANK2Q9BZ23 570 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 LINC00597Q9H2U6 94 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 MAGEC2Q9UBF1 373 aaPredicted RBP16.71■□□□□ 0.27
LINC01116-202ENST00000339037 CDH9Q9ULB4 789 aa16.71■□□□□ 0.27
LINC01116-202ENST00000339037 PTPRJQ12913 1337 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 IGF2RP11717 2491 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 EML5Q05BV3 1969 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 PRPF6O94906 941 aaKnown RBP16.7■□□□□ 0.26
LINC01116-202ENST00000339037 BDNFP23560 247 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 LMO2P25791 158 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 GRIK1P39086 918 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 DGKEP52429 567 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 SHC2P98077 582 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 CYP27A1Q02318 531 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 DUOXA2Q1HG44 320 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 DENND5BQ6ZUT9 1274 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 STXBP4Q6ZWJ1 553 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 LIMS2Q7Z4I7 341 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 CBWD2Q8IUF1 395 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 CCDC65Q8IXS2 484 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 EDEM2Q9BV94 578 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 CRTAC1Q9NQ79 661 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 EHD2Q9NZN4 543 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 TRPM5Q9NZQ8 1165 aa16.7■□□□□ 0.26
LINC01116-202ENST00000339037 A0A087X0B3 334 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 BCLAF3A2AJT9 711 aaKnown RBP16.69■□□□□ 0.26
LINC01116-202ENST00000339037 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 KCNK5O95279 499 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 CAVIN2O95810 425 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 PFKLP17858 780 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 ANXA13P27216 316 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 MLLT3P42568 568 aaPredicted RBP16.69■□□□□ 0.26
LINC01116-202ENST00000339037 USP46P62068 366 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 SURF1Q15526 300 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 USP39Q53GS9 565 aaKnown RBP16.69■□□□□ 0.26
LINC01116-202ENST00000339037 C2orf27AQ580R0 203 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 C11orf74Q86VG3 221 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 INTS4Q96HW7 963 aaKnown RBP16.69■□□□□ 0.26
LINC01116-202ENST00000339037 MMS19Q96T76 1030 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 MTMR6Q9Y217 621 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 CACNA1GO43497 2377 aa16.69■□□□□ 0.26
LINC01116-202ENST00000339037 K7ELQ4 463 aaPredicted RBP16.68■□□□□ 0.26
LINC01116-202ENST00000339037 TRIM66O15016 1216 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 PDGFRBP09619 1106 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 WARSP23381 471 aaKnown RBP16.68■□□□□ 0.26
LINC01116-202ENST00000339037 SEC13P55735 322 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 ZXDBP98169 803 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 ANO7Q6IWH7 933 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 PSAPL1Q6NUJ1 521 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 WDR49Q8IV35 697 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 PDILTQ8N807 584 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 MYCBPAPQ8TBZ2 947 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 USP33Q8TEY7 942 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 PCED1BQ96HM7 432 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 USP28Q96RU2 1077 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms