RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CHP1Q99653 195 aa12.2□□□□□ -0.46
SHANK2-201ENST00000338508 IL1RAPL1Q9NZN1 696 aa12.2□□□□□ -0.46
SHANK2-201ENST00000338508 LNPEPQ9UIQ6 1025 aa12.2□□□□□ -0.46
SHANK2-201ENST00000338508 HPS5Q9UPZ3 1129 aa12.2□□□□□ -0.46
SHANK2-201ENST00000338508 METP08581 1390 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 CFAP73A6NFT4 308 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 FAM83EQ2M2I3 478 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 RNF44Q7L0R7 432 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 UCMAQ8WVF2 138 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 NUDT12Q9BQG2 462 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 RHBGQ9H310 441 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 C17orf102A2RUQ5 167 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 NR5A2O00482 541 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 NOTUMQ6P988 496 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 UBP1Q9NZI7 540 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 SH3BP4Q9P0V3 963 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 VTI1BQ9UEU0 232 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 VTNP04004 478 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 TRAF2Q12933 501 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 EPHA7Q15375 998 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 GJB7Q6PEY0 223 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 TLK2Q86UE8 772 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 RGL4Q8IZJ4 473 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 TUFT1Q9NNX1 390 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 AVENQ9NQS1 362 aaPredicted RBP12.19□□□□□ -0.46
SHANK2-201ENST00000338508 IPPQ9Y573 584 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 AP1G2O75843 785 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 ZNF284Q2VY69 593 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 SPATA4Q8NEY3 305 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 NMRK1Q9NWW6 199 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 HLA-DRAP01903 254 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
SHANK2-201ENST00000338508 GALCP54803 685 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 EFEMP1Q12805 493 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 UNC45BQ8IWX7 931 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 RNFT2Q96EX2 444 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 PITPNM2Q9BZ72 1349 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 TARSP26639 723 aaKnown RBP12.19□□□□□ -0.46
SHANK2-201ENST00000338508 RAP1GAPP47736 663 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 SARSP49591 514 aaKnown RBP12.19□□□□□ -0.46
SHANK2-201ENST00000338508 WLSQ5T9L3 541 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 NECAB2Q7Z6G3 386 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 UTP15Q8TED0 518 aaKnown RBP12.19□□□□□ -0.46
SHANK2-201ENST00000338508 NARS2Q96I59 477 aaKnown RBP12.19□□□□□ -0.46
SHANK2-201ENST00000338508 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 KCNK16Q96T55 309 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 CARD9Q9H257 536 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 DPP3Q9NY33 737 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 PLA2G4CQ9UP65 541 aa12.19□□□□□ -0.46
SHANK2-201ENST00000338508 DNMT1P26358 1616 aaKnown RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 PVALEFA0A1B0GWK0 134 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 SEPT1Q8WYJ6 367 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 VPS28Q9UK41 221 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 MT-CO1P00395 513 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 CLTBP09497 229 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 STX4Q12846 297 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 CCNIQ14094 377 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 XKR3Q5GH77 459 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 SEMA4DQ92854 862 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 FRMD6Q96NE9 622 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 MANSC1Q9H8J5 431 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 IARS2Q9NSE4 1012 aaKnown RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 PFASO15067 1338 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 CBX4O00257 560 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 PSMA4P25789 261 aaKnown RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 DNAL1Q4LDG9 190 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 R3HCC1LQ7Z5L2 792 aaKnown RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 MRPS31Q92665 395 aaKnown RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 PNMA5Q96PV4 448 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 COLEC11Q9BWP8 271 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 KLHL25Q9H0H3 589 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 HERC5Q9UII4 1024 aaKnown RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 KLHL2O95198 593 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 FMO5P49326 533 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 USP11P51784 963 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 TAF5Q15542 800 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 ACOX2Q99424 681 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 PHACTR1Q9C0D0 580 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 SPON1Q9HCB6 807 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 PDZK1P1A8MUH7 402 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 ITGA8P53708 1063 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 HIRAP54198 1017 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 SRBD1Q8N5C6 995 aaKnown RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 GPRC5AQ8NFJ5 357 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 BTBD9Q96Q07 612 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 GINS4Q9BRT9 223 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 TEX13BQ9BXU2 312 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 VTA1Q9NP79 307 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 TCOF1Q13428 1488 aaKnown RBP12.18□□□□□ -0.46
SHANK2-201ENST00000338508 CASTOR2A6NHX0 329 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 SERPINB9P50453 376 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 NECTIN1Q15223 517 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 ZNF618Q5T7W0 954 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 ATG16L2Q8NAA4 619 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 CAMKK2Q96RR4 588 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 PAK5Q9P286 719 aa12.18□□□□□ -0.46
SHANK2-201ENST00000338508 NARFQ9UHQ1 456 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms