RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CFAP221Q4G0U5 840 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 VARS2Q5ST30 1063 aaKnown RBP15.47■□□□□ 0.07
CBX3-201ENST00000337620 C7orf61Q8IZ16 206 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 CD101Q93033 1021 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 PIWIL1Q96J94 861 aaKnown RBP15.47■□□□□ 0.07
CBX3-201ENST00000337620 RHOBTB2Q9BYZ6 727 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 CWH43Q9H720 699 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 LTBP2Q14767 1821 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 BAIAP3O94812 1187 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 OR4Q2P0C623 313 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 BDNFP23560 247 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 PSMA2P25787 234 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 SLC6A3Q01959 620 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 ZNF252P-AS1Q0IIN9 211 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 PPIGQ13427 754 aaKnown RBP eCLIP15.46■□□□□ 0.076e-10■□□□□ 9.5
CBX3-201ENST00000337620 MAPRE1Q15691 268 aaKnown RBP15.46■□□□□ 0.07
CBX3-201ENST00000337620 C16orf59Q7L2K0 433 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 ALG3Q92685 438 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 SMARCD1Q96GM5 515 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 KCNK16Q96T55 309 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 SMOQ99835 787 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 CYLDQ9NQC7 956 aa15.46■□□□□ 0.07
CBX3-201ENST00000337620 CCDC66A2RUB6 948 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 F8VP50 259 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 CES2O00748 559 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 FGBP02675 491 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 CTNNA1P35221 906 aaKnown RBP15.46■□□□□ 0.06
CBX3-201ENST00000337620 GTF2F1P35269 517 aaKnown RBP eCLIP15.46■□□□□ 0.06
CBX3-201ENST00000337620 FPGSQ05932 587 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 ELAVL2Q12926 359 aaKnown RBP15.46■□□□□ 0.06
CBX3-201ENST00000337620 BTG3Q14201 252 aaPredicted RBP15.46■□□□□ 0.06
CBX3-201ENST00000337620 PIGHQ14442 188 aaPredicted RBP15.46■□□□□ 0.06
CBX3-201ENST00000337620 NAA30Q147X3 362 aaPredicted RBP15.46■□□□□ 0.06
CBX3-201ENST00000337620 TAF5Q15542 800 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 SLC39A12Q504Y0 691 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 OLFML1Q6UWY5 402 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 ZNF365Q70YC5 407 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 ZDHHC17Q8IUH5 632 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 CLEC4CQ8WTT0 213 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 BCL7CQ8WUZ0 217 aaPredicted RBP15.46■□□□□ 0.06
CBX3-201ENST00000337620 UBE2Q2Q8WVN8 375 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 ZNF689Q96CS4 500 aaPredicted RBP15.46■□□□□ 0.06
CBX3-201ENST00000337620 PKMYT1Q99640 499 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 LCMT1Q9UIC8 334 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 PCDHA3Q9Y5H8 950 aa15.46■□□□□ 0.06
CBX3-201ENST00000337620 TADA3O75528 432 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 FGFR3P22607 806 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 CTNNA2P26232 953 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 RPL34P49207 117 aaKnown RBP15.45■□□□□ 0.06
CBX3-201ENST00000337620 PEX5P50542 639 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 CACNA2D1P54289 1103 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 ADIGQ0VDE8 80 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 ZNF211Q13398 564 aaPredicted RBP15.45■□□□□ 0.06
CBX3-201ENST00000337620 CTXN3Q4LDR2 81 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 DCAF12L1Q5VU92 463 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 CC2D1AQ6P1N0 951 aaPredicted RBP15.45■□□□□ 0.06
CBX3-201ENST00000337620 TAS1R1Q7RTX1 841 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 SPATA2LQ8IUW3 424 aaPredicted RBP15.45■□□□□ 0.06
CBX3-201ENST00000337620 TSC1Q92574 1164 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 LRRC4Q9HBW1 653 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 RNF14Q9UBS8 474 aa15.45■□□□□ 0.06
CBX3-201ENST00000337620 EFCAB8A8MWE9 144 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 CTIFO43310 598 aaKnown RBP15.44■□□□□ 0.06
CBX3-201ENST00000337620 MAN1A1P33908 653 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 C4orf50Q6ZRC1 276 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 DCP1BQ8IZD4 617 aaKnown RBP15.44■□□□□ 0.06
CBX3-201ENST00000337620 UBXN4Q92575 508 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 YME1L1Q96TA2 773 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 CARD9Q9H257 536 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 TMEM30AQ9NV96 361 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 PDGFRAP16234 1089 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 SYN1P17600 705 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 GJC1P36383 396 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 ARPP19P56211 112 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 RWDD2BP57060 319 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 TAS2R40P59535 323 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 TEX35Q5T0J7 233 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 ZNF280DQ6N043 979 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 KCNT2Q6UVM3 1135 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 SIX6OS1Q8N1H7 587 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 ZMIZ2Q8NF64 920 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 FNIP1Q8TF40 1166 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 RXFP2Q8WXD0 754 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 KCTD13Q8WZ19 329 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 GOLGA1Q92805 767 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 TTPALQ9BTX7 342 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 ZCWPW1Q9H0M4 648 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 TMEM59LQ9UK28 342 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.44■□□□□ 0.06
CBX3-201ENST00000337620 ALPK3Q96L96 1907 aa15.44■□□□□ 0.06
CBX3-201ENST00000337620 LAMA2P24043 3122 aaKnown RBP15.43■□□□□ 0.06
CBX3-201ENST00000337620 CAPN15O75808 1086 aa15.43■□□□□ 0.06
CBX3-201ENST00000337620 GPD1P21695 349 aa15.43■□□□□ 0.06
CBX3-201ENST00000337620 FLT3P36888 993 aa15.43■□□□□ 0.06
CBX3-201ENST00000337620 NDUFV1P49821 464 aa15.43■□□□□ 0.06
CBX3-201ENST00000337620 TKTL1P51854 596 aa15.43■□□□□ 0.06
CBX3-201ENST00000337620 MRPL58Q14197 206 aaKnown RBP15.43■□□□□ 0.06
CBX3-201ENST00000337620 ERCC6LQ2NKX8 1250 aa15.43■□□□□ 0.06
CBX3-201ENST00000337620 RTP2Q5QGT7 225 aa15.43■□□□□ 0.06
CBX3-201ENST00000337620 AADACL2Q6P093 401 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms