RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 HOXA6P31267 233 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 AFMP43652 599 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 PPP3CCP48454 512 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 GALK1P51570 392 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 CYP24A1Q07973 514 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 DMWDQ09019 674 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 PSMD2Q13200 908 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 PSMD6Q15008 389 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 FBXO43Q4G163 708 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 DENND5BQ6ZUT9 1274 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 ARL14EPQ8N8R7 260 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-202ENST00000337571 CCDC26Q8TAB7 109 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 GOLGA5Q8TBA6 731 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 OSCP1Q8WVF1 389 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 SCFD1Q8WVM8 642 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 KBTBD7Q8WVZ9 684 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 MYLPFQ96A32 169 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 SYAP1Q96A49 352 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-202ENST00000337571 CGRRF1Q99675 332 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 P2RY13Q9BPV8 354 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 SLC39A2Q9NP94 309 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 HPS4Q9NQG7 708 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 PCDHA7Q9UN72 937 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 GVINP1Q7Z2Y8 2422 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 A8MXQ7 604 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 TGFB1I1O43294 461 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 TACC1O75410 805 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 F13A1P00488 732 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 ARSAP15289 507 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 PFKLP17858 780 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 ATICP31939 592 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 GJA4P35212 333 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 AP3M2P53677 418 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 BIRC3Q13489 604 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 KNOP1Q1ED39 458 aaKnown RBP11.37□□□□□ -0.59
CAPN3-202ENST00000337571 MDH1BQ5I0G3 518 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 TDRD10Q5VZ19 366 aaKnown RBP11.37□□□□□ -0.59
CAPN3-202ENST00000337571 FSTL4Q6MZW2 842 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 LIMS2Q7Z4I7 341 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 WDR5BQ86VZ2 330 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 CAMKK1Q8N5S9 505 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 SH3RF2Q8TEC5 729 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 PCED1BQ96HM7 432 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 SLC22A12Q96S37 553 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 MRPL45Q9BRJ2 306 aaKnown RBP11.37□□□□□ -0.59
CAPN3-202ENST00000337571 ECT2Q9H8V3 914 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 CRTAC1Q9NQ79 661 aa11.37□□□□□ -0.59
CAPN3-202ENST00000337571 NXF1Q9UBU9 619 aaKnown RBP11.37□□□□□ -0.59
CAPN3-202ENST00000337571 RALGAPA1Q6GYQ0 2036 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 CCDC163A0A0D9SF12 145 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 C2orf78A6NCI8 922 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 OTOL1A6NHN0 477 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-202ENST00000337571 RNF40O75150 1001 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 RPP40O75818 363 aaKnown RBP11.36□□□□□ -0.59
CAPN3-202ENST00000337571 NFATC1O95644 943 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 EGFP01133 1207 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 CCDC192P0DO97 292 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 PTPN1P18031 435 aaKnown RBP11.36□□□□□ -0.59
CAPN3-202ENST00000337571 CASP1P29466 404 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 ATXN1P54253 815 aaKnown RBP11.36□□□□□ -0.59
CAPN3-202ENST00000337571 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
CAPN3-202ENST00000337571 SRSF5Q13243 272 aaKnown RBP11.36□□□□□ -0.59
CAPN3-202ENST00000337571 CUL4BQ13620 913 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 ZNF77Q15935 545 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 CSRP2Q16527 193 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 CCDC142Q17RM4 750 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 WDR44Q5JSH3 913 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 RESP18Q5W5W9 173 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 CACNA2D4Q7Z3S7 1137 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 FAM160A2Q8N612 972 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-202ENST00000337571 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 CD101Q93033 1021 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 C8orf48Q96LL4 319 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 SLITRK1Q96PX8 696 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 RTKNQ9BST9 563 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 ELOVL4Q9GZR5 314 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 SEMA4GQ9NTN9 838 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 GCNT4Q9P109 453 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 ARHGAP26Q9UNA1 814 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 WNT6Q9Y6F9 365 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 GREB1Q4ZG55 1949 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 DNAH14Q0VDD8 3507 aa11.36□□□□□ -0.59
CAPN3-202ENST00000337571 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 ANAPC1Q9H1A4 1944 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-202ENST00000337571 F8VP50 259 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 SLC9A3R1O14745 358 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-202ENST00000337571 AXIN1O15169 862 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 TADA3O75528 432 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
CAPN3-202ENST00000337571 SLFN14P0C7P3 912 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 P4HA1P13674 534 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 TRIM21P19474 475 aaKnown RBP11.35□□□□□ -0.59
CAPN3-202ENST00000337571 TGM1P22735 817 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 PXNP49023 591 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-202ENST00000337571 MYL6P60660 151 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 IFRD2Q12894 506 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-202ENST00000337571 BMT2Q1RMZ1 405 aa11.35□□□□□ -0.59
CAPN3-202ENST00000337571 EML3Q32P44 896 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms