RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 MYCNP04198 464 aaPredicted RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 ZNF865P0CJ78 1059 aaPredicted RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 VDRP11473 427 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 AFF1P51825 1210 aaKnown RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 MFSD10Q14728 455 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 SLC27A1Q6PCB7 646 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 UNC45BQ8IWX7 931 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 NETO2Q8NC67 525 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 PGM2Q96G03 612 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 PRMT1Q99873 361 aaKnown RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 GCOM2Q9BZD3 368 aaPredicted RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 SLC45A1Q9Y2W3 748 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 TRAPPC3O43617 180 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 GBP1P32455 592 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 VCPP55072 806 aaKnown RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 TAF1CQ15572 869 aaPredicted RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 SOWAHAQ2M3V2 549 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 CYP4V2Q6ZWL3 525 aaPredicted RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 ARFGAP2Q8N6H7 521 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 MCRS1Q96EZ8 462 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 NGRNQ9NPE2 291 aaKnown RBP24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 HOXD8P13378 290 aaPredicted RBP24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 ATICP31939 592 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 CETN2P41208 172 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 INCA1Q0VD86 236 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 MYO1EQ12965 1108 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 CCDC13Q8IYE1 715 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 ZFP42Q96MM3 310 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 GMNCA6NCL1 334 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 DARSP14868 501 aaKnown RBP24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 ZNF157P51786 506 aaPredicted RBP24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 CA9Q16790 459 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 ANKRD42Q8N9B4 389 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 FAM71DQ8N9W8 422 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 OSBPL7Q9BZF2 842 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 VRTNQ9H8Y1 702 aa24.25■■□□□ 1.47
CLPTM1-201ENST00000337392 P4HA1P13674 534 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 MMP13P45452 471 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 SPDYCQ5MJ68 293 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 LRRC38Q5VT99 294 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 ZNF410Q86VK4 478 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 NR2E3Q9Y5X4 410 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 TRUB2O95900 331 aaKnown RBP24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 HMGCRP04035 888 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 CTGFP29279 349 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 CDH6P55285 790 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 MAP2K5Q13163 448 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 MPP2Q14168 576 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 C6orf118Q5T5N4 469 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 C1orf228Q6PIY5 440 aa24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 TRMT10CQ7L0Y3 403 aaKnown RBP24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 ARHGEF2Q92974 986 aaKnown RBP24.24■■□□□ 1.47
CLPTM1-201ENST00000337392 DNALI1O14645 258 aaPredicted RBP24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 ATP2C2O75185 946 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 MAGEA4P43358 317 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 LIG3P49916 1009 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 ZNF268Q14587 947 aaPredicted RBP24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 SNX17Q15036 470 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 SPRED3Q2MJR0 410 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 MSS51Q4VC12 460 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 MORN1Q5T089 497 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 CYP3A43Q9HB55 503 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 A8MXQ7 604 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 FAM107AO95990 144 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 TAP1Q03518 808 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 IFT88Q13099 833 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 NOTUMQ6P988 496 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 LCLAT1Q6UWP7 414 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 ZBED8Q8IZ13 594 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 SLC35B2Q8TB61 432 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 ATXN2LQ8WWM7 1075 aaKnown RBP24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 XPO6Q96QU8 1125 aaKnown RBP24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 ZIC5Q96T25 663 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 KIF9Q9HAQ2 790 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 HOMER3Q9NSC5 361 aa24.23■■□□□ 1.47
CLPTM1-201ENST00000337392 NRCAMQ92823 1304 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 C2CD4BA6NLJ0 364 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 RNF8O76064 485 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 CCDC14Q49A88 953 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 C9orf57Q5W0N0 161 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 PPP1R2P3Q6NXS1 205 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 SMIM28A0A1B0GU29 152 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 SLC15A5A6NIM6 579 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 PAPSS1O43252 624 aaPredicted RBP24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 CTSHP09668 335 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 LCP1P13796 627 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 ACAT1P24752 427 aaKnown RBP24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 EFTUD2Q15029 972 aaKnown RBP eCLIP24.22■■□□□ 1.472e-6■■■■■ 32.6
CLPTM1-201ENST00000337392 HADHQ16836 314 aaKnown RBP24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 SYDE1Q6ZW31 735 aaPredicted RBP24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 TAX1BP1Q86VP1 789 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 GDAP1Q8TB36 358 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 KHSRPQ92945 711 aaKnown RBP eCLIP24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 KCNK9Q9NPC2 374 aa24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 DDX56Q9NY93 547 aaKnown RBP24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 DDX20Q9UHI6 824 aaKnown RBP24.22■■□□□ 1.47
CLPTM1-201ENST00000337392 POC1B-GALNT4F8VUJ3 575 aa24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 GABRB2P47870 512 aa24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 PSEN2P49810 448 aa24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 ZBTB6Q15916 424 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms