RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 KCNK13Q9HB14 408 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 NDC80O14777 642 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 SP100P23497 879 aaPredicted RBP20.84■□□□□ 0.93
CDCA4-201ENST00000336219 CPA2P48052 419 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 GRM1Q13255 1194 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 RASA2Q15283 850 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 CYP4A22Q5TCH4 519 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 CATSPERGQ6ZRH7 1159 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 BANPQ8N9N5 519 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 SCG3Q8WXD2 468 aaKnown RBP20.84■□□□□ 0.93
CDCA4-201ENST00000336219 TMEM120AQ9BXJ8 343 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 PPCSQ9HAB8 311 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 ARMCX1Q9P291 453 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 FARP1Q9Y4F1 1045 aaPredicted RBP20.84■□□□□ 0.93
CDCA4-201ENST00000336219 CAPN9O14815 690 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 GYG2O15488 501 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 EIF4BP23588 611 aaKnown RBP20.84■□□□□ 0.93
CDCA4-201ENST00000336219 RCN2Q14257 317 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 KCNT1Q5JUK3 1230 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 ZBTB33Q86T24 672 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 DCAKDQ8WVC6 231 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 TFAP2BQ92481 460 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 PCYT2Q99447 389 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 PCDHGC3Q9UN70 934 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 FZD1Q9UP38 647 aa20.84■□□□□ 0.93
CDCA4-201ENST00000336219 C3orf70A6NLC5 250 aaPredicted RBP20.83■□□□□ 0.93
CDCA4-201ENST00000336219 KIF3CO14782 793 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 CCDC22O60826 627 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 GNAT1P11488 350 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 VHLP40337 213 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 ARFIP2P53365 341 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 BBS9Q3SYG4 887 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 ADGRD1Q6QNK2 874 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 TTC17Q96AE7 1141 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 TSSK1BQ9BXA7 367 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 STOML1Q9UBI4 398 aa20.83■□□□□ 0.93
CDCA4-201ENST00000336219 C19orf81C9J6K1 198 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 MSCO60682 206 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 TBX10O75333 385 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 TMEM63AO94886 807 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 BGNP21810 368 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 ZBTB16Q05516 673 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 EN1Q05925 392 aaPredicted RBP20.83■□□□□ 0.92
CDCA4-201ENST00000336219 SGSM1Q2NKQ1 1148 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 POLNQ7Z5Q5 900 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 TEKT4Q8WW24 435 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 TSC22D3Q99576 134 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 TCHPQ9BT92 498 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 TRIM55Q9BYV6 548 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 ZWILCHQ9H900 591 aa20.83■□□□□ 0.92
CDCA4-201ENST00000336219 TOM1L1O75674 476 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 WEE2P0C1S8 567 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 OTUD4Q01804 1114 aaKnown RBP20.82■□□□□ 0.92
CDCA4-201ENST00000336219 CNTN2Q02246 1040 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 ZNF772Q68DY9 489 aaPredicted RBP20.82■□□□□ 0.92
CDCA4-201ENST00000336219 IGDCC3Q8IVU1 814 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 MICALL2Q8IY33 904 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 ACTL9Q8TC94 416 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 NSL1Q96IY1 281 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 SERAC1Q96JX3 654 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 FAM111AQ96PZ2 611 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 WASF2Q9Y6W5 498 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 E5RJQ4 531 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 RPS12P25398 132 aaKnown RBP20.82■□□□□ 0.92
CDCA4-201ENST00000336219 DUOXA2Q1HG44 320 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 CMPK2Q5EBM0 449 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 PCGF5Q86SE9 256 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 ATP11CQ8NB49 1132 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 DNERQ8NFT8 737 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 MCUR1Q96AQ8 359 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 DHRS4Q9BTZ2 278 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 MRPL4Q9BYD3 311 aaKnown RBP20.82■□□□□ 0.92
CDCA4-201ENST00000336219 MAF1Q9H063 256 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 TAS2R1Q9NYW7 299 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 CHMP2BQ9UQN3 213 aa20.82■□□□□ 0.92
CDCA4-201ENST00000336219 SPDYE16A6NNV3 312 aaPredicted RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 LMNAP02545 664 aaKnown RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 UBA1P22314 1058 aaKnown RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 SLC25A11Q02978 314 aaKnown RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 MDH1BQ5I0G3 518 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 SPDYAQ5MJ70 313 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 ALYREFQ86V81 257 aaKnown RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 ZC3H18Q86VM9 953 aaKnown RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 VPS52Q8N1B4 723 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 FBXO27Q8NI29 283 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 SH3TC2Q8TF17 1288 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 PRPF31Q8WWY3 499 aaKnown RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 SKA1Q96BD8 255 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 CAMKK2Q96RR4 588 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 NRBP2Q9NSY0 501 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 AGTPBP1Q9UPW5 1226 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 EFR3BQ9Y2G0 817 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 LPXNO60711 386 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 PSMG1O95456 288 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 ITGBL1O95965 494 aaPredicted RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 NEFHP12036 1026 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 PSMA2P25787 234 aa20.81■□□□□ 0.92
CDCA4-201ENST00000336219 RFC1P35251 1148 aaPredicted RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 RPL22P35268 128 aaKnown RBP20.81■□□□□ 0.92
CDCA4-201ENST00000336219 SCARA5Q6ZMJ2 495 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms