RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 PHACTR1Q9C0D0 580 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 ROGDIQ9GZN7 287 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 C8orf4Q9NR00 106 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 PCSK1NQ9UHG2 260 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF222Q9UK12 451 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 DUSP12Q9UNI6 340 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 STARD13Q9Y3M8 1113 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 A0A0X1KG70 313 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 PCP4L1A6NKN8 68 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 CLDN3O15551 220 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 CYP2D6P10635 497 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 IL12AP29459 219 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 GCLMP48507 274 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 C5orf22Q49AR2 442 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 OR6Y1Q8NGX8 325 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 GRPEL2Q8TAA5 225 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 SPATA18Q8TC71 538 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 AP5M1Q9H0R1 490 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 ARMC7Q9H6L4 198 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 TJP2Q9UDY2 1190 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 DSEQ9UL01 958 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 FSBPO95073 299 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 SEC24AO95486 1093 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 GSTM1P09488 218 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 CLTBP09497 229 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 POLR2EP19388 210 aaKnown RBP6.39□□□□□ -1.39
CSMD1-201ENST00000335551 AKT1P31749 480 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 BTDP43251 543 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 GPC3P51654 580 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 GUF1Q8N442 669 aaKnown RBP6.39□□□□□ -1.39
CSMD1-201ENST00000335551 PPP1R14AQ96A00 147 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 CMTM6Q9NX76 183 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 DDX20Q9UHI6 824 aaKnown RBP6.39□□□□□ -1.39
CSMD1-201ENST00000335551 WWP2O00308 870 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 ADCY6O43306 1168 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 PRKCQQ04759 706 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 SYDE2Q5VT97 1194 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 CLEC4GQ6UXB4 293 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 TRPC4APQ8TEL6 797 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 OSBPL6Q9BZF3 934 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 SLC52A2Q9HAB3 445 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 SNX9Q9Y5X1 595 aa6.39□□□□□ -1.39
CSMD1-201ENST00000335551 VPS4BO75351 444 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SMNDC1O75940 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 WEE2P0C1S8 567 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TSPAN19P0C672 248 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ACADLP28330 430 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ARHGDIBP52566 201 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TOP3AQ13472 1001 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RASA2Q15283 850 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 MYDGFQ969H8 173 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 BTBD10Q9BSF8 475 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 AKAP7Q9P0M2 348 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 MLXQ9UH92 298 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TTC37Q6PGP7 1564 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ATRXP46100 2492 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 H3BMM5 538 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 NR5A2O00482 541 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 KRT36O76013 467 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RAG1P15918 1043 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RASA1P20936 1047 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 S100GP29377 79 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 DNAJC3Q13217 504 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 POLD3Q15054 466 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CRELD2Q6UXH1 353 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TRAPPC11Q7Z392 1133 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 C11orf74Q86VG3 221 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 PJA1Q8NG27 643 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 AFG1LQ8WV93 481 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CENPIQ92674 756 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TSEN34Q9BSV6 310 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 INTS2Q9H0H0 1204 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 GOLPH3Q9H4A6 298 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 KLHL1Q9NR64 748 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 A0A0G2JPF8 293 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 HNRNPCL3B7ZW38 293 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 KIAA0391O15091 583 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TPST1O60507 370 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ATG7O95352 703 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 HNRNPCL4P0DMR1 293 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ITGA8P53708 1063 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SEC24CP53992 1094 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 YWHAZP63104 245 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 BROXQ5VW32 411 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CLEC17AQ6ZS10 378 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TMPRSS6Q8IU80 811 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 LRRC34Q8IZ02 419 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 C10orf53Q8N6V4 93 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RHOBTB2Q9BYZ6 727 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 METTL5Q9NRN9 209 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TCF4P15884 667 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 NAB2Q15742 525 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 GSTA3Q16772 222 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 OTOAQ7RTW8 1153 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 MTDHQ86UE4 582 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 DCAF4Q8WV16 495 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RSAD1Q9HA92 442 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 NCKAP5LQ9HCH0 1330 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 GPR108Q9NPR9 543 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RAB6BQ9NRW1 208 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms