RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PPIL6Q8IXY8 311 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 ZNF276Q8N554 614 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 HIPK4Q8NE63 616 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 GMCL1P1Q8NEA9 526 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 DTNBP1Q96EV8 351 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 KCNH7Q9NS40 1196 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 PARVAQ9NVD7 372 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 COPEO14579 308 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 CYP24A1Q07973 514 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 FAAP100Q0VG06 881 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 ULK2Q8IYT8 1036 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 PPM1HQ9ULR3 514 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 NFKBIEO00221 500 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 CDC16Q13042 620 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 PRKD1Q15139 912 aaPredicted RBP14.34□□□□□ -0.11
SYNE3-201ENST00000334258 PCGF5Q86SE9 256 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 ZNF677Q86XU0 584 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 TREML1Q86YW5 311 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 PPP2R3CQ969Q6 453 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 SERAC1Q96JX3 654 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 MCEEQ96PE7 176 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 PANX3Q96QZ0 392 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 RIT2Q99578 217 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 MECRQ9BV79 373 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 IDI2Q9BXS1 227 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 SLC13A1Q9BZW2 595 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 DNAAF2Q9NVR5 837 aaKnown RBP14.34□□□□□ -0.11
SYNE3-201ENST00000334258 MRPL11Q9Y3B7 192 aaKnown RBP14.34□□□□□ -0.11
SYNE3-201ENST00000334258 CCDC160A6NGH7 325 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 CYP1A1P04798 512 aaPredicted RBP14.34□□□□□ -0.11
SYNE3-201ENST00000334258 VIL1P09327 827 aaKnown RBP14.34□□□□□ -0.11
SYNE3-201ENST00000334258 ITGB5P18084 799 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 CDK7P50613 346 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 SOX10P56693 466 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 PSMC5P62195 406 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 MTMR2Q13614 643 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 TFDP3Q5H9I0 405 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 TXNRD3NBQ6F5E7 133 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 HIC2Q96JB3 615 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 MXRA8Q9BRK3 442 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 EBF3Q9H4W6 596 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 SLC7A8Q9UHI5 535 aa14.34□□□□□ -0.11
SYNE3-201ENST00000334258 XPO7Q9UIA9 1087 aaKnown RBP14.34□□□□□ -0.11
SYNE3-201ENST00000334258 DRG1Q9Y295 367 aaKnown RBP14.34□□□□□ -0.11
SYNE3-201ENST00000334258 F8W8V4 182 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 MAGEC1O60732 1142 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 TGDSO95455 350 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 NPTX2P47972 431 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 RAP1GDS1P52306 607 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 MED21Q13503 144 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.33□□□□□ -0.11
SYNE3-201ENST00000334258 NET1Q7Z628 596 aaPredicted RBP14.33□□□□□ -0.11
SYNE3-201ENST00000334258 ACTL9Q8TC94 416 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 TMC2Q8TDI7 906 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 SLC26A7Q8TE54 656 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 DCAKDQ8WVC6 231 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 PYDC1Q8WXC3 89 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 OLFM3Q96PB7 478 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 OCEL1Q9H607 264 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 ZWILCHQ9H900 591 aa14.33□□□□□ -0.11
SYNE3-201ENST00000334258 E5RJQ4 531 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 NDC80O14777 642 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 RNASEH1O60930 286 aaKnown RBP14.33□□□□□ -0.12
SYNE3-201ENST00000334258 EPHB1P54762 984 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 NOMO3P69849 1222 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
SYNE3-201ENST00000334258 MAP7Q14244 749 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 SMTNL2Q2TAL5 461 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 CIAPIN1Q6FI81 312 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 DNAJC24Q6P3W2 148 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 MARK2Q7KZI7 788 aaKnown RBP14.33□□□□□ -0.12
SYNE3-201ENST00000334258 ABRAQ8N0Z2 381 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 CPT1BQ92523 772 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 CCDC124Q96CT7 223 aaKnown RBP14.33□□□□□ -0.12
SYNE3-201ENST00000334258 NMD3Q96D46 503 aaKnown RBP14.33□□□□□ -0.12
SYNE3-201ENST00000334258 APOPT1Q96IL0 206 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 ZNF395Q9H8N7 513 aaPredicted RBP14.33□□□□□ -0.12
SYNE3-201ENST00000334258 MEI4A8MW99 385 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 HLA-DRAP01903 254 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 CCNFP41002 786 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 AQP5P55064 265 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 SNRPFP62306 86 aaKnown RBP14.33□□□□□ -0.12
SYNE3-201ENST00000334258 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
SYNE3-201ENST00000334258 ASPHQ12797 758 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 KBTBD12Q3ZCT8 623 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 FAM182AQ5T1J6 154 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 PPM1NQ8N819 430 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 GSTCDQ8NEC7 633 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 PPP1R14CQ8TAE6 165 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 MYOZ2Q9NPC6 264 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 TAGLN3Q9UI15 199 aa14.33□□□□□ -0.12
SYNE3-201ENST00000334258 LTBP1Q14766 1721 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 hCG_2014768A0A024R1R8 64 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 A6NJR5 290 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 PEX10O60683 326 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 TM7SF2O76062 418 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 YY1P25490 414 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 GDF10P55107 478 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 ACTR3P61158 418 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms