RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 IL1RAPL1Q9NZN1 696 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 HBS1LQ9Y450 684 aaKnown RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 UNCXA6NJT0 531 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 PDLIM1O00151 329 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 PDK1Q15118 436 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 ANO4Q32M45 955 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 RNF19BQ6ZMZ0 732 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SH3BP5LQ7L8J4 393 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 AMIGO2Q86SJ2 522 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SEPT12Q8IYM1 358 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 ZBED8Q8IZ13 594 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 HAPLN3Q96S86 360 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 CCT7Q99832 543 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 TBC1D23Q9NUY8 699 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 RRN3Q9NYV6 651 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 FAM198AQ9UFP1 575 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 CIDEBQ9UHD4 219 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 CTDP1Q9Y5B0 961 aaPredicted RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 IKBKGQ9Y6K9 419 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SCINQ9Y6U3 715 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 EP400Q96L91 3159 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 A6NL46 340 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 EIF3FO00303 357 aaPredicted RBP12.37□□□□□ -0.43
LIMK2-202ENST00000333611 FCHO1O14526 889 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 ZC3H11AO75152 810 aaKnown RBP eCLIP12.37□□□□□ -0.43
LIMK2-202ENST00000333611 KRT4P19013 534 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 FASTKD3Q14CZ7 662 aaKnown RBP12.37□□□□□ -0.43
LIMK2-202ENST00000333611 LPCAT2Q7L5N7 544 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 MBOAT7Q96N66 472 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 FIZ1Q96SL8 496 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 SYT11Q9BT88 431 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 CCDC134Q9H6E4 229 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 RABL2AQ9UBK7 228 aaPredicted RBP12.37□□□□□ -0.43
LIMK2-202ENST00000333611 SEL1LQ9UBV2 794 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 GTF3C4Q9UKN8 822 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 FRMPD4Q14CM0 1322 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 SMIM31A0A1B0GVY4 71 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 DENND3A2RUS2 1198 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 ITIH2P19823 946 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 SLC25A3Q00325 362 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 GSTM4Q03013 218 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 GPS1Q13098 491 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 LMO3Q8TAP4 145 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 USP33Q8TEY7 942 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 GAB3Q8WWW8 586 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 ROPN1BQ9BZX4 212 aaPredicted RBP12.37□□□□□ -0.43
LIMK2-202ENST00000333611 TMEM206Q9H813 350 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 ROPN1Q9HAT0 212 aaPredicted RBP12.37□□□□□ -0.43
LIMK2-202ENST00000333611 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
LIMK2-202ENST00000333611 A0A1W2PPM1 405 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 SIGLEC16A6NMB1 481 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 MAGEA4P43358 317 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 RPL5P46777 297 aaKnown RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 ARPC4P59998 168 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 PRAMEP78395 509 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 OTUD4Q01804 1114 aaKnown RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 RASA2Q15283 850 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 PRPF39Q86UA1 669 aaKnown RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 ZNF75CPQ92670 426 aaPredicted RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 TRIM56Q9BRZ2 755 aaKnown RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 TSSK1BQ9BXA7 367 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 C1orf112Q9NSG2 853 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 CCPG1Q9ULG6 757 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 COQ6Q9Y2Z9 468 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 FAM237BA0A1B0GVD1 139 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 BHMG1C9JSJ3 638 aaPredicted RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 SEC24DO94855 1032 aaPredicted RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 GGPS1O95749 300 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 PABPC4LP0CB38 370 aaKnown RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 NR4A1P22736 598 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 RCVRNP35243 200 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 CD97P48960 835 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 SLC5A3P53794 718 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 FOLH1Q04609 750 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 METTL21CQ5VZV1 264 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 KRT39Q6A163 491 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 OGFOD2Q6N063 350 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 GLIS1Q8NBF1 620 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 DDHD1Q8NEL9 900 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 ZFP28Q8NHY6 868 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 IL31RAQ8NI17 732 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 EHMT1Q9H9B1 1298 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 IFT122Q9HBG6 1241 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 USP29Q9HBJ7 922 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 KCNH7Q9NS40 1196 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 NOCTQ9UK39 431 aaKnown RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 DTNAQ9Y4J8 743 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 STK24Q9Y6E0 443 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 PLIN4Q96Q06 1357 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 SGK1O00141 431 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 CASQ2O14958 399 aaPredicted RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 EDF1O60869 148 aaKnown RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 ZBTB11O95625 1053 aaPredicted RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 CD300CQ08708 224 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 PPP6R3Q5H9R7 873 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms