RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 DNAJC6O75061 913 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 GJB1P08034 283 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 GLRA2P23416 452 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 RPL21P46778 160 aaKnown RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 RAD23BP54727 409 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 PRAMEF19Q5SWL8 479 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 KRT80Q6KB66 452 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 SLFN11Q7Z7L1 901 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 ZNF518BQ9C0D4 1074 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 MANSC1Q9H8J5 431 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 GPRC5DQ9NZD1 345 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 CCDC22O60826 627 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 LMNAP02545 664 aaKnown RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 RARAP10276 462 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 BCAT1P54687 386 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 CHSY1Q86X52 802 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 CD302Q8IX05 232 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 APOL2Q9BQE5 337 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 GANQ9H2C0 597 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 KCTD10Q9H3F6 313 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 AP4E1Q9UPM8 1137 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 PJA2O43164 708 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 THP07101 528 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 ATXN3P54252 364 aaPredicted RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 BEX3Q00994 111 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 PDE1CQ14123 709 aaPredicted RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 MIB1Q86YT6 1006 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 SCUBE3Q8IX30 993 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 DTX3LQ8TDB6 740 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 STAMBPL1Q96FJ0 436 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 ZBTB18Q99592 522 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 PEX10O60683 326 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 PGM1P36871 562 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 NNMTP40261 264 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 KRT35Q92764 455 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 SHCBP1LQ9BZQ2 653 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 FOXP3Q9BZS1 431 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 PORCNQ9H237 461 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 GPBP1L1Q9HC44 474 aaPredicted RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 SLC39A10Q9ULF5 831 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 EEF1B2P24534 225 aaKnown RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 TNFSF9P41273 254 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 FBXO47Q5MNV8 452 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 TREML2Q5T2D2 321 aa13.53□□□□□ -0.24
VSTM4-202ENST00000332853 PIH1D1Q9NWS0 290 aaKnown RBP13.53□□□□□ -0.24
VSTM4-202ENST00000332853 CHUKO15111 745 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 FAM107AO95990 144 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 SERPINB9P50453 376 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 ZBTB41Q5SVQ8 909 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 DAB2IPQ5VWQ8 1189 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 DCLK3Q9C098 648 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.52□□□□□ -0.24
VSTM4-202ENST00000332853 GJC2Q5T442 439 aaPredicted RBP13.52□□□□□ -0.24
VSTM4-202ENST00000332853 PSD3Q9NYI0 1048 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 ITGA11Q9UKX5 1188 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 BARX2Q9UMQ3 279 aaPredicted RBP13.52□□□□□ -0.24
VSTM4-202ENST00000332853 PHLPP1O60346 1717 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 KIF13AQ9H1H9 1805 aa13.52□□□□□ -0.24
VSTM4-202ENST00000332853 CFAP73A6NFT4 308 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ZBTB22O15209 634 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 RARGP13631 454 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ATICP31939 592 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 STIP1P31948 543 aaKnown RBP13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.25
VSTM4-202ENST00000332853 TMEM161BQ8NDZ6 487 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ZSWIM2Q8NEG5 633 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 BAP1Q92560 729 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 EDEM1Q92611 657 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ACKR2O00590 384 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 TBC1D12O60347 775 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 MCF2P10911 925 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 CCDC130P13994 396 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 CPA2P48052 419 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 GCNT1Q02742 428 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
VSTM4-202ENST00000332853 TWF1Q12792 350 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 MFSD10Q14728 455 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 TLK2Q86UE8 772 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 CNPY3Q9BT09 278 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 MRPL46Q9H2W6 279 aaKnown RBP13.52□□□□□ -0.25
VSTM4-202ENST00000332853 DDX43Q9NXZ2 648 aaKnown RBP13.52□□□□□ -0.25
VSTM4-202ENST00000332853 VAV3Q9UKW4 847 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ORC6Q9Y5N6 252 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 PSMD3O43242 534 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ANP32DO95626 131 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 LGALS2P05162 132 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 MYL2P10916 166 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 HSPA8P11142 646 aaKnown RBP13.52□□□□□ -0.25
VSTM4-202ENST00000332853 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 SZRD1Q7Z422 152 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 BRSK2Q8IWQ3 736 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ACTL9Q8TC94 416 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 SNX19Q92543 992 aa13.52□□□□□ -0.25
VSTM4-202ENST00000332853 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
VSTM4-202ENST00000332853 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms