RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CHMP6Q96FZ7 201 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 PIWIL1Q96J94 861 aaKnown RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 CNPY3Q9BT09 278 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 MIS12Q9H081 205 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 SAYSD1Q9NPB0 183 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 DDX20Q9UHI6 824 aaKnown RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 GGA2Q9UJY4 613 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 GNEQ9Y223 722 aaKnown RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 SMIM35A0A1B0GVV1 85 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 C2CD4BA6NLJ0 364 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 CYP2C9P11712 490 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 ZBTB6Q15916 424 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 PPP1R26Q5T8A7 1209 aaPredicted RBP18.24■□□□□ 0.51
DDX28-201ENST00000332395 RNASEH2BQ5TBB1 312 aaKnown RBP18.24■□□□□ 0.51
DDX28-201ENST00000332395 CYP4F22Q6NT55 531 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 TRNP1Q6NT89 227 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 MBLAC1A4D2B0 266 aaPredicted RBP18.24■□□□□ 0.51
DDX28-201ENST00000332395 ABHD2P08910 425 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 DARSP14868 501 aaKnown RBP18.24■□□□□ 0.51
DDX28-201ENST00000332395 STAT4Q14765 748 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 GLRA4Q5JXX5 417 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 SH3PXD2AQ5TCZ1 1133 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 FBXW10Q5XX13 1052 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 CPLX4Q7Z7G2 160 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 ACOT1Q86TX2 421 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 RFX6Q8HWS3 928 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 BEST2Q8NFU1 509 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 RXFP2Q8WXD0 754 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 C18orf25Q96B23 403 aaPredicted RBP18.24■□□□□ 0.51
DDX28-201ENST00000332395 ZNF317Q96PQ6 595 aaPredicted RBP18.24■□□□□ 0.51
DDX28-201ENST00000332395 PEBP4Q96S96 227 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 NXF3Q9H4D5 531 aaKnown RBP18.24■□□□□ 0.51
DDX28-201ENST00000332395 CPA4Q9UI42 421 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 SHOC2Q9UQ13 582 aa18.24■□□□□ 0.51
DDX28-201ENST00000332395 NDC80O14777 642 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 KIAA0754O94854 1291 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 PDGFRAP16234 1089 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 DRD4P21917 467 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 RGS7P49802 495 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 GDF10P55107 478 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 PCBP1Q15365 356 aaKnown RBP eCLIP18.23■□□□□ 0.51
DDX28-201ENST00000332395 MORN1Q5T089 497 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 LRRC52Q8N7C0 313 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 LENG1Q96BZ8 264 aaPredicted RBP18.23■□□□□ 0.51
DDX28-201ENST00000332395 CFAP57Q96MR6 1250 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 PRMT1Q99873 361 aaKnown RBP18.23■□□□□ 0.51
DDX28-201ENST00000332395 CCDC77Q9BR77 488 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 CALN1Q9BXU9 219 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 TRIM6Q9C030 488 aaPredicted RBP18.23■□□□□ 0.51
DDX28-201ENST00000332395 C10orf88Q9H8K7 445 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 LGALS13Q9UHV8 139 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 NME7Q9Y5B8 376 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 APOC4-APOC2K7ER74 178 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 CDH16O75309 829 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 RECQL4O94761 1208 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 APOC2P02655 101 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 MFSD10Q14728 455 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 C15orf59Q2T9L4 293 aaPredicted RBP18.23■□□□□ 0.51
DDX28-201ENST00000332395 PKDCCQ504Y2 493 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 PMF1Q6P1K2 205 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 TLK2Q86UE8 772 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 TTC30AQ86WT1 665 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 PRCCQ92733 491 aaPredicted RBP18.23■□□□□ 0.51
DDX28-201ENST00000332395 CCDC134Q9H6E4 229 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 RSAD1Q9HA92 442 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 FAM49BQ9NUQ9 324 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 CNTN3Q9P232 1028 aa18.23■□□□□ 0.51
DDX28-201ENST00000332395 GRAP2O75791 330 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 CREB1P16220 341 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 MAP2K5Q13163 448 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 HIC1Q14526 733 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 FASTKD3Q14CZ7 662 aaKnown RBP18.22■□□□□ 0.51
DDX28-201ENST00000332395 RAB6CQ53S08 254 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 OLFML2BQ68BL8 750 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 CHADLQ6NUI6 762 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 C6orf89Q6UWU4 347 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 ALKAL1Q6UXT8 129 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 CYP4V2Q6ZWL3 525 aaPredicted RBP18.22■□□□□ 0.51
DDX28-201ENST00000332395 YTHDF3Q7Z739 585 aaKnown RBP18.22■□□□□ 0.51
DDX28-201ENST00000332395 DNAJB3Q8WWF6 145 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 SEC16BQ96JE7 1060 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 TTC25Q96NG3 672 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 RAB6CQ9H0N0 254 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDX28-201ENST00000332395 FLRT1Q9NZU1 646 aa18.22■□□□□ 0.51
DDX28-201ENST00000332395 FARP1Q9Y4F1 1045 aaPredicted RBP18.22■□□□□ 0.51
DDX28-201ENST00000332395 TMEM120BA0PK00 339 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 IFT88Q13099 833 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 CDO1Q16878 200 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 CCDC142Q17RM4 750 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 GKAP1Q5VSY0 366 aaPredicted RBP18.21■□□□□ 0.51
DDX28-201ENST00000332395 C9orf57Q5W0N0 161 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 OLFML1Q6UWY5 402 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 VSTM1Q6UX27 236 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 CYP4X1Q8N118 509 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 RSAD2Q8WXG1 361 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 APOL6Q9BWW8 343 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 RNF19AQ9NV58 838 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 TBK1Q9UHD2 729 aa18.21■□□□□ 0.51
DDX28-201ENST00000332395 NAALADL1Q9UQQ1 740 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms