RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 FAM163BP0C2L3 166 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 PDGFRAP16234 1089 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 GPD1P21695 349 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 IVDP26440 423 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 SCNN1GP51170 649 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 APLP1P51693 650 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 KRT17Q04695 432 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 TAZQ16635 292 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 HADHQ16836 314 aaKnown RBP17.82■□□□□ 0.44
DDX41-201ENST00000330503 FMO2Q99518 471 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 CNPY3Q9BT09 278 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 B3GNT5Q9BYG0 378 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 ASNSD1Q9NWL6 643 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 PCSK1NQ9UHG2 260 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 H0YGN5 161 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 GABRDO14764 452 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 PPFIA2O75334 1257 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 KRT7P08729 469 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 TKTP29401 623 aaKnown RBP17.81■□□□□ 0.44
DDX41-201ENST00000330503 CLCNKBP51801 687 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
DDX41-201ENST00000330503 BST2Q10589 180 aaKnown RBP17.81■□□□□ 0.44
DDX41-201ENST00000330503 PPP1R7Q15435 360 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 CCDC142Q17RM4 750 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 SMTNL2Q2TAL5 461 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 CCDC14Q49A88 953 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 TFDP3Q5H9I0 405 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 SLC2A14Q8TDB8 520 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 ART4Q93070 314 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 SENP8Q96LD8 212 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 PRDM10Q9NQV6 1147 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 NFS1Q9Y697 457 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 TP73O15350 636 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 TJP3O95049 919 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 KDELR1P24390 212 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 PTK6Q13882 451 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 C15orf59Q2T9L4 293 aaPredicted RBP17.81■□□□□ 0.44
DDX41-201ENST00000330503 KIAA0319Q5VV43 1072 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 SYDE1Q6ZW31 735 aaPredicted RBP17.81■□□□□ 0.44
DDX41-201ENST00000330503 B3GALNT2Q8NCR0 500 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 C3orf58Q8NDZ4 430 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 CMASQ8NFW8 434 aaPredicted RBP17.81■□□□□ 0.44
DDX41-201ENST00000330503 ARL8AQ96BM9 186 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 PEBP4Q96S96 227 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 ADAM2Q99965 735 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 TRPV6Q9H1D0 765 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 NOD1Q9Y239 953 aa17.81■□□□□ 0.44
DDX41-201ENST00000330503 HTTP42858 3142 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 A0A0U1RQF3 1178 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 RNF8O76064 485 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 INHAP05111 366 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 GBP1P32455 592 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 PCK1P35558 622 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 MAP2K2P36507 400 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 VEGFBP49765 207 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 BCAT1P54687 386 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 PAQR9Q6ZVX9 377 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 CYP4V2Q6ZWL3 525 aaPredicted RBP17.8■□□□□ 0.44
DDX41-201ENST00000330503 GRK7Q8WTQ7 553 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 TNIP3Q96KP6 325 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 PAAF1Q9BRP4 392 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 FEZ2Q9UHY8 353 aaPredicted RBP17.8■□□□□ 0.44
DDX41-201ENST00000330503 ADAM21Q9UKJ8 722 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 USP18Q9UMW8 372 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 PLAAQ9Y263 795 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 DPYSL4O14531 572 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 LIASO43766 372 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 OPA1O60313 960 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 CD48P09326 243 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 PTPN1P18031 435 aaKnown RBP17.8■□□□□ 0.44
DDX41-201ENST00000330503 ACAT1P24752 427 aaKnown RBP17.8■□□□□ 0.44
DDX41-201ENST00000330503 TRIP13Q15645 432 aaPredicted RBP17.8■□□□□ 0.44
DDX41-201ENST00000330503 TRAF7Q6Q0C0 670 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 FUKQ8N0W3 1084 aa17.8■□□□□ 0.44
DDX41-201ENST00000330503 HNRNPABQ99729 332 aaKnown RBP17.8■□□□□ 0.44
DDX41-201ENST00000330503 TSEN34Q9BSV6 310 aaKnown RBP17.8■□□□□ 0.44
DDX41-201ENST00000330503 MOXD2PA6NHM9 499 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 GNRH1P01148 92 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 RAB27AP51159 221 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 ODF2Q5BJF6 829 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 DRICH1Q6PGQ1 229 aaPredicted RBP17.79■□□□□ 0.44
DDX41-201ENST00000330503 SLC43A3Q8NBI5 491 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 RNF169Q8NCN4 708 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 CLEC4CQ8WTT0 213 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 CFAP57Q96MR6 1250 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 WHRNQ9P202 907 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 DNPEPQ9ULA0 475 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 EFR3BQ9Y2G0 817 aa17.79■□□□□ 0.44
DDX41-201ENST00000330503 CLDN5O00501 218 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 CKBP12277 381 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 RPL9P32969 192 aaKnown RBP17.78■□□□□ 0.44
DDX41-201ENST00000330503 SNX16P57768 344 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 UPP1Q16831 310 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 TTMPQ5BVD1 217 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 LRIG3Q6UXM1 1119 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 ZDHHC17Q8IUH5 632 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 GLT1D1Q96MS3 346 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 EPB41L4BQ9H329 900 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 RSAD1Q9HA92 442 aa17.78■□□□□ 0.44
DDX41-201ENST00000330503 CYLDQ9NQC7 956 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms