RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 KBTBD12Q3ZCT8 623 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 FYB2Q5VWT5 728 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 CIAPIN1Q6FI81 312 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 RNF149Q8NC42 400 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 ZNF280CQ8ND82 737 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 TWNKQ96RR1 684 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 PPP1R16BQ96T49 567 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 ACSS3Q9H6R3 686 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 ACAD9Q9H845 621 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 MANSC1Q9H8J5 431 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 KBTBD13C9JR72 458 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 ADCY3O60266 1144 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 ERBB2P04626 1255 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 FAAP100Q0VG06 881 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 CDO1Q16878 200 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 XRRA1Q6P2D8 792 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 ADGRD1Q6QNK2 874 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 RINLQ6ZS11 566 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 APBB1IPQ7Z5R6 666 aaPredicted RBP18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 CCDC33Q8N5R6 958 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 BANPQ8N9N5 519 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 KCTD6Q8NC69 237 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 TRAPPC12Q8WVT3 735 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 MECRQ9BV79 373 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 E5RJQ4 531 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 MSCO60682 206 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 LPXNO60711 386 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 ZWINTO95229 277 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 UBA1P22314 1058 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 YWHAGP61981 247 aaKnown RBP eCLIP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 PTK7Q13308 1070 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 KHDC1Q4VXA5 237 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 MDH1BQ5I0G3 518 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 PRPF39Q86UA1 669 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 SPATA18Q8TC71 538 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 CFAP36Q96G28 342 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 ZNF395Q9H8N7 513 aaPredicted RBP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 DDX56Q9NY93 547 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 LCTP09848 1927 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 TCRBV9S1A1TA0A576 114 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 C2CD2LO14523 706 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 KIF3CO14782 793 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 PYGBP11216 843 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 MIPP30301 263 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 PHBP35232 272 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 PTDSS1P48651 473 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 ENPEPQ07075 957 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 WDR49Q8IV35 697 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 INPP5DQ92835 1189 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 PIWIL1Q96J94 861 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 TEX13BQ9BXU2 312 aa18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 CADM1Q9BY67 442 aaKnown RBP18.17■□□□□ 0.5
PTP4A3-201ENST00000329397 CENPFP49454 3210 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 LSM8O95777 96 aaKnown RBP18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 PTPRAP18433 802 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 YY1P25490 414 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 EN1Q05925 392 aaPredicted RBP18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 DUOXA2Q1HG44 320 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 C1orf228Q6PIY5 440 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 CDHR3Q6ZTQ4 885 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 PDIK1LQ8N165 341 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 CDHR1Q96JP9 859 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 PEBP4Q96S96 227 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 TSSK1BQ9BXA7 367 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 XYLT2Q9H1B5 865 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 PHIPQ8WWQ0 1821 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 CCDC195A0A1B0GUA6 201 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 MT-ND3P03897 115 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 TROVE2P10155 538 aaKnown RBP eCLIP18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 ZBTB16Q05516 673 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 SLC45A4Q5BKX6 768 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 BBS12Q6ZW61 710 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 CTAGE3PQ8IX95 158 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 DTX3LQ8TDB6 740 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 NLRP4Q96MN2 994 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 SDCBP2Q9H190 292 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 R3HDMLQ9H3Y0 253 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 GJA3Q9Y6H8 435 aa18.16■□□□□ 0.5
PTP4A3-201ENST00000329397 ATP5HO75947 161 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 HOXC6P09630 235 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 SLC18A1P54219 525 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 SMAD1Q15797 465 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 C15orf59Q2T9L4 293 aaPredicted RBP18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 EEF1DP3Q658K8 133 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 UBA3Q8TBC4 463 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 TMEM120AQ9BXJ8 343 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 SMYD3Q9H7B4 428 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 PICK1Q9NRD5 415 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 GPATCH2LQ9NWQ4 482 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 UGT1A9O60656 530 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 TOM1L1O75674 476 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 SMNDC1O75940 238 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■■□ 20.7
PTP4A3-201ENST00000329397 ATG7O95352 703 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 CXCL8P10145 99 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 PTPN4P29074 926 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 PCK1P35558 622 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 STXBP2Q15833 593 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 MICALL2Q8IY33 904 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 DHRS4Q9BTZ2 278 aa18.15■□□□□ 0.5
PTP4A3-201ENST00000329397 OSBPL1AQ9BXW6 950 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms