RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 GRAP2O75791 330 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 KCNA4P22459 653 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 IGBP1P78318 339 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 TMEM132AQ24JP5 1023 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 SCARA3Q6AZY7 606 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 HHIPL2Q6UWX4 724 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 NPNTQ6UXI9 565 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 MOCOSQ96EN8 888 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 PRPF18Q99633 342 aaKnown RBP9.96□□□□□ -0.81
DDX53-201ENST00000327968 IL1RAPL1Q9NZN1 696 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 LTBP3Q9NS15 1303 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 CLRN2A0PK11 232 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 LIASO43766 372 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 PROSCO94903 275 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 WEE2P0C1S8 567 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 SOX11P35716 441 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 RPL10AP62906 217 aaKnown RBP9.96□□□□□ -0.81
DDX53-201ENST00000327968 OCRLQ01968 901 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 AP3B2Q13367 1082 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 BMT2Q1RMZ1 405 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 CEP55Q53EZ4 464 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 ZC3H12AQ5D1E8 599 aaKnown RBP9.96□□□□□ -0.81
DDX53-201ENST00000327968 C1orf220Q5T0J3 134 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 IL31Q6EBC2 164 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 DNAJC24Q6P3W2 148 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 HPS6Q86YV9 775 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 ACER1Q8TDN7 264 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 GATA6Q92908 595 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 PGBD4Q96DM1 585 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 AGBL1Q96MI9 1066 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 SRPK1Q96SB4 655 aaKnown RBP9.96□□□□□ -0.81
DDX53-201ENST00000327968 KMT5AQ9NQR1 393 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 SLC17A6Q9P2U8 582 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 PRR12Q9ULL5 1215 aa9.96□□□□□ -0.81
DDX53-201ENST00000327968 MTO1Q9Y2Z2 717 aaKnown RBP9.96□□□□□ -0.81
DDX53-201ENST00000327968 GOLGA8QA0A0J9YX86 632 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 GOLGA8OA6NCC3 632 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 TCP10L2B9ZVM9 353 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 GOLGA8NF8WBI6 632 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 AIM2O14862 343 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 CD48P09326 243 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 RAG1P15918 1043 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 SREBF1P36956 1147 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 BPIFB4P59827 614 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 PDE1BQ01064 536 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 CTC1Q2NKJ3 1217 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 STRIP1Q5VSL9 837 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 DARS2Q6PI48 645 aaKnown RBP9.96□□□□□ -0.82
DDX53-201ENST00000327968 CRLF3Q8IUI8 442 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 IGDCC3Q8IVU1 814 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 NDUFAF2Q8N183 169 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 OR6Y1Q8NGX8 325 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.96□□□□□ -0.82
DDX53-201ENST00000327968 SHC3Q92529 594 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 TTC25Q96NG3 672 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 TRAPPC9Q96Q05 1148 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 FIS1Q9Y3D6 152 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 NR2E3Q9Y5X4 410 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 ZHX2Q9Y6X8 837 aa9.96□□□□□ -0.82
DDX53-201ENST00000327968 MYO18AQ92614 2054 aaKnown RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 CLUHO75153 1309 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 UMODL1Q5DID0 1318 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 TYROBPO43914 113 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 FUT4P22083 530 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 ABCG1P45844 678 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 GK3PQ14409 553 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 MYLK4Q86YV6 388 aaPredicted RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 DEFB107AQ8IZN7 70 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 USP13Q92995 863 aaPredicted RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 E2F7Q96AV8 911 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 CLMNQ96JQ2 1002 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 FIZ1Q96SL8 496 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 POLR3CQ9BUI4 534 aaPredicted RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 TDRD3Q9H7E2 651 aaKnown RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 SAR1AQ9NR31 198 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 NXF1Q9UBU9 619 aaKnown RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 ZNF212Q9UDV6 495 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 FAF1Q9UNN5 650 aaPredicted RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 SMARCA1P28370 1054 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 MAPK10P53779 464 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 ACBD5Q5T8D3 534 aaPredicted RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 CDR2LQ86X02 465 aaPredicted RBP9.95□□□□□ -0.82
DDX53-201ENST00000327968 UNC45BQ8IWX7 931 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 CERS5Q8N5B7 392 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 TTLL6Q8N841 843 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 ITFG2Q969R8 447 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 MKL1Q969V6 931 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 FAF2Q96CS3 445 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 TMEM206Q9H813 350 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 RABGEF1Q9UJ41 708 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 PCDHGB4Q9UN71 923 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 DOLKQ9UPQ8 538 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 PCDHGB5Q9Y5G0 923 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 ANKRD12Q6UB98 2062 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 SCN9AQ15858 1988 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 PLIN4Q96Q06 1357 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 CCDC78A2IDD5 438 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 SIGLEC16A6NMB1 481 aa9.95□□□□□ -0.82
DDX53-201ENST00000327968 WDR64B1ANS9 1081 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms