RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 CLCN3P51790 818 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ZNF132P52740 706 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 PTK7Q13308 1070 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 KPNB1Q14974 876 aaKnown RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 ZC3H12AQ5D1E8 599 aaKnown RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 TRNP1Q6NT89 227 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 SCYL3Q8IZE3 742 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 C12orf29Q8N999 325 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 NAT8LQ8N9F0 302 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ZNF280CQ8ND82 737 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ACAP3Q96P50 834 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 CXCL16Q9H2A7 254 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 LRMDAQ9H2I8 198 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 MANSC1Q9H8J5 431 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 H7C0C1 242 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ATP2A1O14983 1001 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 PRPF4O43172 522 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLGN-201ENST00000325617 MT-ND3P03897 115 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 TCF7P36402 384 aaPredicted RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 GRIA1P42261 906 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ATP5OP48047 213 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 PTDSS1P48651 473 aaKnown RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 GMPSP49915 693 aaPredicted RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 RCN2Q14257 317 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 HSDL1Q3SXM5 330 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 EFHC2Q5JST6 749 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 TRIM72Q6ZMU5 477 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 UCMAQ8WVF2 138 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 NAF1Q96HR8 494 aaKnown RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 SHCBP1LQ9BZQ2 653 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 NIF3L1Q9GZT8 377 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 RNPEPL1Q9HAU8 725 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 PCDH9Q9HC56 1237 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 IL1RAPL1Q9NZN1 696 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 SNCAIPQ9Y6H5 919 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 TCRBV9S1A1TA0A576 114 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 NFICP08651 508 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ABHD2P08910 425 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 NAMPTP43490 491 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ASPAP45381 313 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 STAT5BP51692 787 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ATXN1P54253 815 aaKnown RBP13.72□□□□□ -0.21
CLGN-201ENST00000325617 CDH6P55285 790 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 ARL4CP56559 192 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 CRADDP78560 199 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 PPP1R15BQ5SWA1 713 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 PPIL6Q8IXY8 311 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 MMP19Q99542 508 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 TMEM120AQ9BXJ8 343 aa13.72□□□□□ -0.21
CLGN-201ENST00000325617 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLGN-201ENST00000325617 HCRTO43612 131 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 ADCY3O60266 1144 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 MSCO60682 206 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 ARIH2O95376 493 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 CALB1P05937 261 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 IQCF3P0C7M6 154 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 GCKP35557 465 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 LMNB2Q03252 620 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 ACVR2BQ13705 512 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 FAM102AQ5T9C2 384 aaPredicted RBP13.71□□□□□ -0.21
CLGN-201ENST00000325617 WDR78Q5VTH9 848 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 RTKN2Q8IZC4 609 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 SLC25A41Q8N5S1 370 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 ZBED3Q96IU2 234 aaPredicted RBP13.71□□□□□ -0.21
CLGN-201ENST00000325617 VCPIP1Q96JH7 1222 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 TSSK1BQ9BXA7 367 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 ACAD9Q9H845 621 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 PICK1Q9NRD5 415 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 RAB6BQ9NRW1 208 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 STYXL1Q9Y6J8 313 aa13.71□□□□□ -0.21
CLGN-201ENST00000325617 EME2A4GXA9 379 aaPredicted RBP13.71□□□□□ -0.22
CLGN-201ENST00000325617 SPDYE5A6NIY4 337 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 PRKCBP05771 671 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 ITGAVP06756 1048 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 MYL2P10916 166 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 TFE3P19532 575 aaPredicted RBP13.71□□□□□ -0.22
CLGN-201ENST00000325617 CALB2P22676 271 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 PHKA2P46019 1235 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 LAMTOR4Q0VGL1 99 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 DPYSL3Q14195 570 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 DUOXA2Q1HG44 320 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 CTC1Q2NKJ3 1217 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 GNPTABQ3T906 1256 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 PPP6R3Q5H9R7 873 aaPredicted RBP13.71□□□□□ -0.22
CLGN-201ENST00000325617 TREML2Q5T2D2 321 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 ANGEL2Q5VTE6 544 aaKnown RBP13.71□□□□□ -0.22
CLGN-201ENST00000325617 BRSK2Q8IWQ3 736 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 ATP11CQ8NB49 1132 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 MZB1Q8WU39 189 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 CPB2Q96IY4 423 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 OSBPL1AQ9BXW6 950 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 CEP41Q9BYV8 373 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 TRIM6Q9C030 488 aaPredicted RBP13.71□□□□□ -0.22
CLGN-201ENST00000325617 XYLT2Q9H1B5 865 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 ACSS2Q9NR19 701 aa13.71□□□□□ -0.22
CLGN-201ENST00000325617 MAFBQ9Y5Q3 323 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms