RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 RANBP1P43487 201 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 ZRANB3Q5FWF4 1079 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 PKN3Q6P5Z2 889 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 SAMD7Q7Z3H4 446 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 PATL1Q86TB9 770 aaKnown RBP11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 ARID3BQ8IVW6 561 aaPredicted RBP11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 UNC45BQ8IWX7 931 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 PRMT6Q96LA8 375 aaPredicted RBP11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 GDF3Q9NR23 364 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 OLFML3Q9NRN5 406 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 TMX2Q9Y320 296 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 MCL1Q07820 350 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 PTRHD1Q6GMV3 140 aaKnown RBP11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 LRRN4CLQ8ND94 238 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 TMEM120AQ9BXJ8 343 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 DCLK3Q9C098 648 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 RIPK2O43353 540 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 CNTFP26441 200 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 NFIAQ12857 509 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 FAM83EQ2M2I3 478 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 CDR2LQ86X02 465 aaPredicted RBP11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 ZFYVE28Q9HCC9 887 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 KLK14Q9P0G3 267 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 USP18Q9UMW8 372 aa11.32□□□□□ -0.6
SNRNP200-201ENST00000323853 SDR42E2A6NKP2 422 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 TM9SF1O15321 606 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 ZSCAN9O15535 394 aaPredicted RBP11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 PSMC6P62333 389 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 DAB2P98082 770 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 KBTBD12Q3ZCT8 623 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 CNBD2Q96M20 576 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 ILKAPQ9H0C8 392 aaPredicted RBP11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 AAR2Q9Y312 384 aaKnown RBP11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 MYOM1P52179 1685 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 KBTBD13C9JR72 458 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 ACADSP16219 412 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 ATICP31939 592 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 PPP3CCP48454 512 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 MRPS35P82673 323 aaKnown RBP11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 DMC1Q14565 340 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 HORMAD1Q86X24 394 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 GPATCH2LQ9NWQ4 482 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 ZBTB39O15060 712 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 HARS2P49590 506 aaKnown RBP11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 PGM5Q15124 567 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 C10orf120Q5SQS8 335 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 TDRD10Q5VZ19 366 aaKnown RBP11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 SLFN11Q7Z7L1 901 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 OTUB1Q96FW1 271 aaPredicted RBP11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 TMEM121Q9BTD3 319 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 SLC24A2Q9UI40 661 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 H0Y626 953 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 TRIM16O95361 564 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 RRM1P23921 792 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 OR1G1P47890 313 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 RGS4P49798 205 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 C6orf10Q5SRN2 563 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 AGAP9Q5VTM2 703 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 IARS2Q9NSE4 1012 aaKnown RBP11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 MAGEA13PA6NCF6 341 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 SERPINB5P36952 375 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 NEK2P51955 445 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 RCN1Q15293 331 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 UGT3A1Q6NUS8 523 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 TMEM176AQ96HP8 235 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 VPS50Q96JG6 964 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 FAR2Q96K12 515 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 KCND1Q9NSA2 647 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 CYP2B6P20813 491 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 PLD3Q8IV08 490 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 ADGRF2Q8IZF7 708 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 TAGLN3Q9UI15 199 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 PCDHB7Q9Y5E2 793 aa11.31□□□□□ -0.6
SNRNP200-201ENST00000323853 CCL15-CCL14A0A0B4J2E2 113 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 DDTLA6NHG4 134 aaPredicted RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 ARHGEF9O43307 516 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 CCL15Q16663 113 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 WLSQ5T9L3 541 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 TIGD7Q6NT04 549 aaPredicted RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 RRM2BQ7LG56 351 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 ZNF512Q96ME7 567 aaPredicted RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 DUSP9Q99956 384 aaKnown RBP11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 APOL5Q9BWW9 433 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 LOC100653049A0A140TA62 436 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 SOAT2O75908 522 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 KRT34O76011 436 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 GYS1P13807 737 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 SHMT1P34896 483 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 SOX11P35716 441 aa11.3□□□□□ -0.6
SNRNP200-201ENST00000323853 IRX1P78414 480 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms