RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 GMPRP36959 345 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 USP4Q13107 963 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 ORC1Q13415 861 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 TAF5Q15542 800 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 SNRNP48Q6IEG0 339 aaKnown RBP12.75□□□□□ -0.37
SEC24A-201ENST00000322887 C17orf99Q6UX52 265 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 CCDC33Q8N5R6 958 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 FBXO36Q8NEA4 188 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 MORC4Q8TE76 937 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 PLVAPQ9BX97 442 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 MANSC1Q9H8J5 431 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 IRAK4Q9NWZ3 460 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 TBX20Q9UMR3 447 aa12.75□□□□□ -0.37
SEC24A-201ENST00000322887 DHX15O43143 795 aaKnown RBP12.74□□□□□ -0.37
SEC24A-201ENST00000322887 TMEM63AO94886 807 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 RFX1P22670 979 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 ARFIP2P53365 341 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 WASHC2DQ5SRD0 308 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 RNASEH2BQ5TBB1 312 aaKnown RBP12.74□□□□□ -0.37
SEC24A-201ENST00000322887 ZCCHC23Q6ZST2 131 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 RHOT1Q8IXI2 618 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 CLEC4DQ8WXI8 215 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 IFT43Q96FT9 208 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 ACAP3Q96P50 834 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 TRIM4Q9C037 500 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 UBE2OQ9C0C9 1292 aaKnown RBP12.74□□□□□ -0.37
SEC24A-201ENST00000322887 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 PACSIN3Q9UKS6 424 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 PPM1HQ9ULR3 514 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 MYH9P35579 1960 aaKnown RBP12.74□□□□□ -0.37
SEC24A-201ENST00000322887 HNRNPDLO14979 420 aaKnown RBP12.74□□□□□ -0.37
SEC24A-201ENST00000322887 UGT1A9O60656 530 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 PYGBP11216 843 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 TNNI1P19237 187 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 RPS6KA3P51812 740 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 SLC45A4Q5BKX6 768 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 B3GNT9Q6UX72 402 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 TMEM161BQ8NDZ6 487 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 FGD4Q96M96 766 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 SLITRK1Q96PX8 696 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 MMP19Q99542 508 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 TSSK1BQ9BXA7 367 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 MOV10L1Q9BXT6 1211 aaKnown RBP12.74□□□□□ -0.37
SEC24A-201ENST00000322887 TMEM206Q9H813 350 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 UGT1A7Q9HAW7 530 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 UGT1A10Q9HAW8 530 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 UGT1A8Q9HAW9 530 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 TMEM8AQ9HCN3 771 aa12.74□□□□□ -0.37
SEC24A-201ENST00000322887 PSMC3IPQ9P2W1 217 aaPredicted RBP12.74□□□□□ -0.37
SEC24A-201ENST00000322887 BPTFQ12830 3046 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 KLHL33A6NCF5 533 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 B2RBV5 119 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 FCHO1O14526 889 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 TJP3O95049 919 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 NPTXRO95502 500 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 ESRRAP11474 423 aaPredicted RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 GPC3P51654 580 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 HSD17B4P51659 736 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 GTF2BQ00403 316 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 FAAP100Q0VG06 881 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 UBAP2LQ14157 1087 aaKnown RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 RAB6CQ53S08 254 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 FAXCQ5TGI0 409 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 FYB2Q5VWT5 728 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 BICD1Q96G01 975 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 EPAS1Q99814 870 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 C20orf27Q9GZN8 174 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 RAB6CQ9H0N0 254 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 ACAD9Q9H845 621 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 STOML1Q9UBI4 398 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 UBE4BO95155 1302 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 F5H423 210 aaPredicted RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 RNF8O76064 485 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 CCNE2O96020 404 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 F7P08709 466 aaPredicted RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 PGM1P36871 562 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 NLRP11P59045 1033 aaKnown RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 MRPS9P82933 396 aaKnown RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 CENPCQ03188 943 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 SLC34A1Q06495 639 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 CYP24A1Q07973 514 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 CRHR2Q13324 411 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 BMPR2Q13873 1038 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 RAPH1Q70E73 1250 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 ABRAQ8N0Z2 381 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 GALNT15Q8N3T1 639 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 ALLCQ8N6M5 410 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 PYROXD1Q8WU10 500 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 NSL1Q96IY1 281 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 THTPAQ9BU02 230 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 RNF146Q9NTX7 359 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 SCOCQ9UIL1 159 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 ACTL7BQ9Y614 415 aa12.73□□□□□ -0.37
SEC24A-201ENST00000322887 COL11A1P12107 1806 aaPredicted RBP12.73□□□□□ -0.37
SEC24A-201ENST00000322887 PIK3R2O00459 728 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms