RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TAC1P20366 129 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 GDF10P55107 478 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 GEMIN4P57678 1058 aaKnown RBP23.42■■□□□ 1.34
PNKP-201ENST00000322344 SPARCL1Q14515 664 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 DENND1AQ8TEH3 1009 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 PYROXD1Q8WU10 500 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 HSPH1Q92598 858 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 SSU72Q9NP77 194 aaKnown RBP23.42■■□□□ 1.34
PNKP-201ENST00000322344 ABCF3Q9NUQ8 709 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 DPP3Q9NY33 737 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 ZMYND8Q9ULU4 1186 aaPredicted RBP23.42■■□□□ 1.34
PNKP-201ENST00000322344 MGAMO43451 1857 aa23.42■■□□□ 1.34
PNKP-201ENST00000322344 ENDOD1O94919 500 aa23.41■■□□□ 1.34
PNKP-201ENST00000322344 ITGBL1O95965 494 aaPredicted RBP23.41■■□□□ 1.34
PNKP-201ENST00000322344 WDR4P57081 412 aaKnown RBP23.41■■□□□ 1.34
PNKP-201ENST00000322344 CCNA1P78396 465 aa23.41■■□□□ 1.34
PNKP-201ENST00000322344 TFDP2Q14188 446 aa23.41■■□□□ 1.34
PNKP-201ENST00000322344 KLHL38Q2WGJ6 581 aa23.41■■□□□ 1.34
PNKP-201ENST00000322344 ZNF792Q3KQV3 632 aa23.41■■□□□ 1.34
PNKP-201ENST00000322344 MAK16Q9BXY0 300 aaKnown RBP23.41■■□□□ 1.34
PNKP-201ENST00000322344 SBF1O95248 1867 aa23.41■■□□□ 1.34
PNKP-201ENST00000322344 STIP1P31948 543 aaKnown RBP23.4■■□□□ 1.34
PNKP-201ENST00000322344 MNAT1P51948 309 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 NDST1P52848 882 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 GPX6P59796 221 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 SF3A3Q12874 501 aaKnown RBP eCLIP23.4■■□□□ 1.343e-6■■■□□ 19.1
PNKP-201ENST00000322344 PKN2Q16513 984 aaKnown RBP23.4■■□□□ 1.34
PNKP-201ENST00000322344 FAM47CQ5HY64 1035 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 HP1BP3Q5SSJ5 553 aaPredicted RBP23.4■■□□□ 1.34
PNKP-201ENST00000322344 MTHFD1LQ6UB35 978 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 RGS9BPQ6ZS82 235 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 PARP9Q8IXQ6 854 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 NT5C1AQ9BXI3 368 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 CALN1Q9BXU9 219 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 C2CD4BA6NLJ0 364 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 TSPAN1O60635 241 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 CSDE1O75534 798 aaKnown RBP23.4■■□□□ 1.34
PNKP-201ENST00000322344 SNAPC2Q13487 334 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 ACVR2BQ13705 512 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 GALNTL6Q49A17 601 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 ZC3H12AQ5D1E8 599 aaKnown RBP23.4■■□□□ 1.34
PNKP-201ENST00000322344 ANKRD22Q5VYY1 191 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 RNF43Q68DV7 783 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 CCDC63Q8NA47 563 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 UBA3Q8TBC4 463 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 ZC3H15Q8WU90 426 aaKnown RBP23.4■■□□□ 1.34
PNKP-201ENST00000322344 NLRP7Q8WX94 980 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 RABGEF1Q9UJ41 708 aa23.4■■□□□ 1.34
PNKP-201ENST00000322344 CLUHO75153 1309 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 MCM3APO60318 1980 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.39■■□□□ 1.34
PNKP-201ENST00000322344 GOLGA8MH3BSY2 632 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 VTNP04004 478 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 RBP3P10745 1247 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 PDE4CQ08493 712 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 ADCY1Q08828 1119 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 ZKSCAN8Q15776 578 aaPredicted RBP23.39■■□□□ 1.34
PNKP-201ENST00000322344 SWT1Q5T5J6 900 aaKnown RBP23.39■■□□□ 1.34
PNKP-201ENST00000322344 MAP1SQ66K74 1059 aaPredicted RBP23.39■■□□□ 1.34
PNKP-201ENST00000322344 ANKMY2Q8IV38 441 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 UNC45BQ8IWX7 931 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 PDIK1LQ8N165 341 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 GPRC5AQ8NFJ5 357 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 PITPNM3Q9BZ71 974 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 RNF181Q9P0P0 153 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 KLHL14Q9P2G3 628 aa23.39■■□□□ 1.34
PNKP-201ENST00000322344 A0A1B0GUA9 196 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 CHUKO15111 745 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 UBOX5O94941 541 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 FOXN2P32314 431 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 GRM5P41594 1212 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 PSMC4P43686 418 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 ROR1Q01973 937 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 NOMO1Q15155 1222 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 SNCBQ16143 134 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 FAM133BQ5BKY9 247 aaKnown RBP23.38■■□□□ 1.33
PNKP-201ENST00000322344 OR6B2Q6IFH4 312 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 MAMDC4Q6UXC1 1216 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 CAPN12Q6ZSI9 719 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 USP50Q70EL3 339 aaPredicted RBP23.38■■□□□ 1.33
PNKP-201ENST00000322344 ZNF410Q86VK4 478 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 TMEM130Q8N3G9 435 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 SPATA18Q8TC71 538 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 FBXO41Q8TF61 875 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 AFG1LQ8WV93 481 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 RXFP2Q8WXD0 754 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 PPP1R16BQ96T49 567 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 ACSS3Q9H6R3 686 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 TSPAN16Q9UKR8 245 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 SPAG7O75391 227 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 PDGFRAP16234 1089 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 ATP2A2P16615 1042 aaKnown RBP23.38■■□□□ 1.33
PNKP-201ENST00000322344 CDH6P55285 790 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 TAF5Q15542 800 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 FNBP1LQ5T0N5 605 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 GJC2Q5T442 439 aaPredicted RBP23.38■■□□□ 1.33
PNKP-201ENST00000322344 APBB1IPQ7Z5R6 666 aaPredicted RBP23.38■■□□□ 1.33
PNKP-201ENST00000322344 MAP7D3Q8IWC1 876 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 PEBP4Q96S96 227 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 C16orf70Q9BSU1 422 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms