RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 C17orf75Q9HAS0 396 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 ZNF358Q9NW07 568 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 SEL1LQ9UBV2 794 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 HMGXB4Q9UGU5 601 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 POLRMTO00411 1230 aaKnown RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 PRPF4O43172 522 aaKnown RBP eCLIP10.06□□□□□ -0.81e-6■■■■□ 22.4
RPGR-201ENST00000318842 AHCYL1O43865 530 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 TOM1L1O75674 476 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 ANPEPP15144 967 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 RPL10P27635 214 aaKnown RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 GPC3P51654 580 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 RPS6P62753 249 aaKnown RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 CCDC15Q0P6D6 951 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 SLC45A4Q5BKX6 768 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 GPAT2Q6NUI2 795 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 GALNT15Q8N3T1 639 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 MZB1Q8WU39 189 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 ZNF606Q8WXB4 792 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 INPP5DQ92835 1189 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 SLCO2A1Q92959 643 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 SKA1Q96BD8 255 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 IFT43Q96FT9 208 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 ZNF341Q9BYN7 854 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 AGO4Q9HCK5 861 aaKnown RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 ZNRF3Q9ULT6 936 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 POLIQ9UNA4 740 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 hCG_1818297A0A087WSY0 165 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 MAGEB3O15480 346 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 DGKIO75912 1065 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 BBOX1O75936 387 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 ACO1P21399 889 aaKnown RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 SKIV2L2P42285 1042 aaKnown RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 LIG4P49917 911 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 CDK16Q00536 496 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 PTP4A2Q12974 167 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 CDC16Q13042 620 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 OLFML2BQ68BL8 750 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 CCDC62Q6P9F0 684 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 RFX6Q8HWS3 928 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 ULK2Q8IYT8 1036 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 SNX31Q8N9S9 440 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 FEZF2Q8TBJ5 459 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 RSAD2Q8WXG1 361 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 EZH1Q92800 747 aaPredicted RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 GMCL1Q96IK5 515 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 SRPK1Q96SB4 655 aaKnown RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 ZNF184Q99676 751 aaPredicted RBP10.06□□□□□ -0.8
RPGR-201ENST00000318842 FBXO40Q9UH90 709 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 MAD1L1Q9Y6D9 718 aa10.06□□□□□ -0.8
RPGR-201ENST00000318842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 MAGEB2O15479 319 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 HNRNPRO43390 633 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 PEX1O43933 1283 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 WFS1O76024 890 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 RTN3O95197 1032 aaPredicted RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 CDKN2BP42772 138 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 CCR10P46092 362 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 VCPP55072 806 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 MYL6P60660 151 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 RPL10AP62906 217 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 OASLQ15646 514 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 C15orf59Q2T9L4 293 aaPredicted RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 TBC1D25Q3MII6 688 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 ZC3H12AQ5D1E8 599 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 DENND1BQ6P3S1 775 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 DNAJC24Q6P3W2 148 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 EEPD1Q7L9B9 569 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 CROCCP2Q86T23 111 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 WDTC1Q8N5D0 677 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 PPP1R13LQ8WUF5 828 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 SNRNP27Q8WVK2 155 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 MARK4Q96L34 752 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 GCNAQ96QF7 691 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 ADAMTS6Q9UKP5 1117 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 LRCH1Q9Y2L9 728 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 PCDHB2Q9Y5E7 798 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 ALOX15BO15296 676 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 RARBP10826 455 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 ROR2Q01974 943 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 CENPCQ03188 943 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 EN1Q05925 392 aaPredicted RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 WASHC2DQ5SRD0 308 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 B3GNT9Q6UX72 402 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 HPS6Q86YV9 775 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 GRAMD1AQ96CP6 724 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 POLR3FQ9H1D9 316 aaPredicted RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 LIN28AQ9H9Z2 209 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 COL5A3P25940 1745 aaPredicted RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 XIRP2A4UGR9 3374 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 ADCY6O43306 1168 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 TCEA3O75764 348 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 CSH1P0DML2 217 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 CSH2P0DML3 217 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 SKIP12755 728 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 PSMA2P25787 234 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms