RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 C1orf220Q5T0J3 134 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CAPN12Q6ZSI9 719 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 FAM160B2Q86V87 743 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CERKQ8TCT0 537 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 MZB1Q8WU39 189 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 DCAKDQ8WVC6 231 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CPT1BQ92523 772 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ITPKCQ96DU7 683 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 DDX50Q9BQ39 737 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 HERPUD2Q9BSE4 406 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 RSAD1Q9HA92 442 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 STK32BQ9NY57 414 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PAK5Q9P286 719 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 FAM237BA0A1B0GVD1 139 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 FOXO6A8MYZ6 492 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 UBAP1LF5GYI3 381 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 RBP3P10745 1247 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 MMP8P22894 467 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 DLG4P78352 724 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CYP24A1Q07973 514 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PLEKHO2Q8TD55 490 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 XAB2Q9HCS7 855 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 AGTPBP1Q9UPW5 1226 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SH3BP1Q9Y3L3 701 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CCDC160A6NGH7 325 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 TXNDC9O14530 226 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 HNRNPDLO14979 420 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 FAM58BPP0C7Q3 252 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SSTR1P30872 391 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PLA2G4FQ68DD2 849 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 NLRX1Q86UT6 975 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PHC3Q8NDX5 983 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ACTRT2Q8TDY3 377 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CDKL2Q92772 493 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CLMNQ96JQ2 1002 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF696Q9H7X3 374 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CNOT11Q9UKZ1 510 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 TBX20Q9UMR3 447 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PRPF19Q9UMS4 504 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PLA2G4CQ9UP65 541 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF335Q9H4Z2 1342 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PAPPAQ13219 1627 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF189O75820 626 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 AMPD1P23109 780 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 NCKAP1LP55160 1127 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SPIDRQ14159 915 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ACAP1Q15027 740 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 NIPA2Q8N8Q9 360 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 KLF6Q99612 283 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 IDI2Q9BXS1 227 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ZC3H12CQ9C0D7 883 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CNTN6Q9UQ52 1028 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CACNA1SQ13698 1873 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CASZ1Q86V15 1759 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SLC22A2O15244 555 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TRMUO75648 421 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TOMM70O94826 608 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 SERPINE1P05121 402 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ADRB2P07550 413 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 EIF4BP23588 611 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CCNFP41002 786 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TAS2R40P59535 323 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ESRRGP62508 458 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 NAB1Q13506 487 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TEDDM1Q5T9Z0 273 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 XRRA1Q6P2D8 792 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 FAM43BQ6ZT52 329 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TTC7BQ86TV6 843 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TREML1Q86YW5 311 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ATP6V0A1Q93050 837 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PRICKLE1Q96MT3 831 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 MRPS26Q9BYN8 205 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PLGRKTQ9HBL7 147 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PCDH18Q9HCL0 1135 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ZNRF3Q9ULT6 936 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PCDHGA4Q9Y5G9 962 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CHADO15335 359 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 STK10O94804 968 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 RPL22P35268 128 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 EPHB1P54762 984 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ADARP55265 1226 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 HPCAP84074 193 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PPIDQ08752 370 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 GRIK5Q16478 980 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ABCB5Q2M3G0 1257 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 RINLQ6ZS11 566 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 MCF2L2Q86YR7 1114 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 NDUFAF2Q8N183 169 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 VPS50Q96JG6 964 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 MXRA8Q9BRK3 442 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 NAT9Q9BTE0 207 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 EBF3Q9H4W6 596 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 VPS45Q9NRW7 570 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ZNHIT2Q9UHR6 403 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 SH3GLB1Q9Y371 365 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CDY2AQ9Y6F7 541 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CDY1Q9Y6F8 540 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ARAP2Q8WZ64 1704 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 DOCK2Q92608 1830 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TCRBV9S1A1TA0A576 114 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms