RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OSER1Q9NX31 292 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 MRPL11Q9Y3B7 192 aaKnown RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 USP15Q9Y4E8 981 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 F8VP50 259 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 IGLV3-25P01717 112 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 FYNP06241 537 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 DLATP10515 647 aaKnown RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 GABRB3P28472 473 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 VCPP55072 806 aaKnown RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 ZNF449Q6P9G9 518 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 ANKRD33Q7Z3H0 272 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 GPR142Q7Z601 462 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 CLNKQ7Z7G1 428 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 ERICH1Q86X53 443 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 TREML1Q86YW5 311 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 CHST13Q8NET6 341 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 JOSD2Q8TAC2 188 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 ZNF606Q8WXB4 792 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 GABRQQ9UN88 632 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 E7ENQ6 273 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SIN3BO75182 1162 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 CILPO75339 1184 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SNAI1O95863 264 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 MTMR1Q13613 665 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 AFMIDQ63HM1 303 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 RUFY4Q6ZNE9 571 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 MYCT1Q8N699 235 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 NPLOC4Q8TAT6 608 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 STAMBPL1Q96FJ0 436 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 ANKRD27Q96NW4 1050 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 PCDH9Q9HC56 1237 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 CWC15Q9P013 229 aaKnown RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 CFAP73A6NFT4 308 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 CXorf49A8MYA2 514 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 EBAG9O00559 213 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 DLGAP1O14490 977 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 NRLP54845 237 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 PABPC1LQ4VXU2 614 aaKnown RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 RFWD3Q6PCD5 774 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SPOCD1Q6ZMY3 1216 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 WDR49Q8IV35 697 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 TPH2Q8IWU9 490 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 RNF169Q8NCN4 708 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 DNERQ8NFT8 737 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 KBTBD7Q8WVZ9 684 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 KIFAP3Q92845 792 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 CPXM1Q96SM3 734 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 GPR20Q99678 358 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SLC4A5Q9BY07 1137 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 ZNF518BQ9C0D4 1074 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SLCO1B3Q9NPD5 702 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 HESX1Q9UBX0 185 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 CSADQ9Y600 493 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SDR42E2A6NKP2 422 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 ADCY3O60266 1144 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SLC34A2O95436 690 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 C22orf31O95567 290 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 HOXA11P31270 313 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 POLGP54098 1239 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 KRT76Q01546 638 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 MKRN3Q13064 507 aaKnown RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 IFT88Q13099 833 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 NOMO1Q15155 1222 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 PAQR9Q6ZVX9 377 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 ZNF683Q8IZ20 524 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SLC7A3Q8WY07 619 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 IFT81Q8WYA0 676 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 ZFP91Q96JP5 570 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 GPR78Q96P69 363 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 DENND2DQ9H6A0 471 aaPredicted RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 GOPCQ9HD26 462 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SLC24A2Q9UI40 661 aa8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SCAF8Q9UPN6 1271 aaKnown RBP8.24□□□□□ -1.09
CNOT4-201ENST00000315544 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.098e-7■■■■■ 67
CNOT4-201ENST00000315544 HHLA1C9JL84 531 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 HLA-DOAP06340 250 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 RWDD2BP57060 319 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 MAP2K5Q13163 448 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 DPYSL3Q14195 570 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 IFI16Q16666 785 aaKnown RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 SLC45A4Q5BKX6 768 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 TMEM110Q86TL2 294 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 RFWD2Q8NHY2 731 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 ERMNQ8TAM6 284 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 SLC35F5Q8WV83 523 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 LMBR1Q8WVP7 490 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 DUS3LQ96G46 650 aaKnown RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 ELOVL4Q9GZR5 314 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 FAM107BQ9H098 131 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 TMEM30AQ9NV96 361 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 TMOD2Q9NZR1 351 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 ZNF212Q9UDV6 495 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 NDUFAB1O14561 156 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 BANF1O75531 89 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 GJB1P08034 283 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 SMIM18P0DKX4 95 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 PCK1P35558 622 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 PAFAH1B1P43034 410 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 PSMC4P43686 418 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms