RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 GABBR2O75899 941 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 PDGFRAP16234 1089 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 IGFBP6P24592 240 aaPredicted RBP22.34■■□□□ 1.17
ATG4D-201ENST00000309469 MIPP30301 263 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 RAB27AP51159 221 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 APLP1P51693 650 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 BCAT1P54687 386 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 GYS2P54840 703 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 SLC6A3Q01959 620 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 TRNP1Q6NT89 227 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 SCUBE3Q8IX30 993 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 FBXO25Q8TCJ0 367 aa22.34■■□□□ 1.17
ATG4D-201ENST00000309469 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.34■■□□□ 1.17
ATG4D-201ENST00000309469 C3orf70A6NLC5 250 aaPredicted RBP22.33■■□□□ 1.17
ATG4D-201ENST00000309469 GAS8O95995 478 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 PCK1P35558 622 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 DHX9Q08211 1270 aaKnown RBP22.33■■□□□ 1.17
ATG4D-201ENST00000309469 UAP1Q16222 522 aaPredicted RBP22.33■■□□□ 1.17
ATG4D-201ENST00000309469 SMTNL2Q2TAL5 461 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 KCNT1Q5JUK3 1230 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 ZDHHC17Q8IUH5 632 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 GOLGA6L1Q8N7Z2 621 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 SLC2A14Q8TDB8 520 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 GLT1D1Q96MS3 346 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 CACNG4Q9UBN1 327 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 PCSK1NQ9UHG2 260 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 ADAM21Q9UKJ8 722 aa22.33■■□□□ 1.17
ATG4D-201ENST00000309469 MOXD2PA6NHM9 499 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 PAPSS1O43252 624 aaPredicted RBP22.33■■□□□ 1.16
ATG4D-201ENST00000309469 GRAP2O75791 330 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 TRUB2O95900 331 aaKnown RBP22.33■■□□□ 1.16
ATG4D-201ENST00000309469 MAP2K2P36507 400 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 SCNN1GP51170 649 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 CLCNKBP51801 687 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 MTMR3Q13615 1198 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 PTK6Q13882 451 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 WSCD1Q658N2 575 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 B3GALNT2Q8NCR0 500 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 CCDC114Q96M63 670 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 FAM118BQ9BPY3 351 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 USP18Q9UMW8 372 aa22.33■■□□□ 1.16
ATG4D-201ENST00000309469 A0A0U1RQF3 1178 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 GABRDO14764 452 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 PPFIA2O75334 1257 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 TAF5Q15542 800 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 KHSRPQ92945 711 aaKnown RBP eCLIP22.32■■□□□ 1.16
ATG4D-201ENST00000309469 ART4Q93070 314 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 SENP8Q96LD8 212 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 TSEN34Q9BSV6 310 aaKnown RBP22.32■■□□□ 1.16
ATG4D-201ENST00000309469 TXLNGYQ9BZA5 131 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 FAM129AQ9BZQ8 928 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 PLAAQ9Y263 795 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 EFR3BQ9Y2G0 817 aa22.32■■□□□ 1.16
ATG4D-201ENST00000309469 GOLGA8KD6RF30 607 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 DPYSL4O14531 572 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 INHAP05111 366 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 KDELR1P24390 212 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 RPL9P32969 192 aaKnown RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 RPL34P49207 117 aaKnown RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 SH3PXD2AQ5TCZ1 1133 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 LHX8Q68G74 356 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 ZNF771Q7L3S4 317 aaPredicted RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 RNF169Q8NCN4 708 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 CMASQ8NFW8 434 aaPredicted RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 ADAM2Q99965 735 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 B3GNT5Q9BYG0 378 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 RSAD1Q9HA92 442 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 CYLDQ9NQC7 956 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 WHRNQ9P202 907 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 ASIC3Q9UHC3 531 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 NEU2Q9Y3R4 380 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 SQORQ9Y6N5 450 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 LIASO43766 372 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 CAND2O75155 1236 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 ATP2C2O75185 946 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 PTPN1P18031 435 aaKnown RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 TAZQ16635 292 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 C15orf59Q2T9L4 293 aaPredicted RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 CCDC14Q49A88 953 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 DRICH1Q6PGQ1 229 aaPredicted RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 LRIG3Q6UXM1 1119 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 UBLCP1Q8WVY7 318 aaPredicted RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 EXOC4Q96A65 974 aa22.31■■□□□ 1.16
ATG4D-201ENST00000309469 HNRNPABQ99729 332 aaKnown RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 MTRF1LQ9UGC7 380 aaKnown RBP22.31■■□□□ 1.16
ATG4D-201ENST00000309469 TKTP29401 623 aaKnown RBP22.3■■□□□ 1.16
ATG4D-201ENST00000309469 CALCOCO2Q13137 446 aa22.3■■□□□ 1.16
ATG4D-201ENST00000309469 KCTD6Q8NC69 237 aa22.3■■□□□ 1.16
ATG4D-201ENST00000309469 PGBD4Q96DM1 585 aa22.3■■□□□ 1.16
ATG4D-201ENST00000309469 HSFY1Q96LI6 401 aa22.3■■□□□ 1.16
ATG4D-201ENST00000309469 HMX1Q9NP08 348 aaPredicted RBP22.3■■□□□ 1.16
ATG4D-201ENST00000309469 ATP8A1Q9Y2Q0 1164 aa22.3■■□□□ 1.16
ATG4D-201ENST00000309469 CAPN15O75808 1086 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 ITIH2P19823 946 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 ACAT1P24752 427 aaKnown RBP22.29■■□□□ 1.16
ATG4D-201ENST00000309469 ACADSBP45954 432 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 LMNB2Q03252 620 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 SPDYCQ5MJ68 293 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 TMEM86AQ8N2M4 240 aa22.29■■□□□ 1.16
ATG4D-201ENST00000309469 CFAP57Q96MR6 1250 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms