RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 SLC2A14Q8TDB8 520 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ACTRT1Q8TDG2 376 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CLP1Q92989 425 aaKnown RBP13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PKMYT1Q99640 499 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GPR62Q9BZJ7 368 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CRTAC1Q9NQ79 661 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PACSIN2Q9UNF0 486 aaPredicted RBP13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KIAA1671Q9BY89 1806 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 LCHNA4D1U4 455 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PDE2AO00408 941 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KCNK3O14649 394 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 XPO1O14980 1071 aaKnown RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ATP2C2O75185 946 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TADA2AO75478 443 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KRT3P12035 628 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CCDC130P13994 396 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 LAG3P18627 525 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CTNNA1P35221 906 aaKnown RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PLA2G4AP47712 749 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SLC8A3P57103 927 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RPL7AP62424 266 aaKnown RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PIGHQ14442 188 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ACAP1Q15027 740 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CLUL1Q15846 466 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 DCUN1D2Q6PH85 259 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ARCQ7LC44 396 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 THEM5Q8N1Q8 247 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KCTD13Q8WZ19 329 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 IGSF21Q96ID5 467 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 BTBD6Q96KE9 485 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RNPC3Q96LT9 517 aaKnown RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ZNF558Q96NG5 402 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 LPIN3Q9BQK8 851 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ZBED2Q9BTP6 218 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 VN1R3Q9BXE9 311 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 B3GNT5Q9BYG0 378 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TRIM7Q9C029 511 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SYNCQ9H7C4 482 aa13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TIMM13Q9Y5L4 95 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SPOPO43791 374 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TLL1O43897 1013 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GABBR2O75899 941 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FGFR3P22607 806 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ACAT1P24752 427 aaKnown RBP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TKTP29401 623 aaKnown RBP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CXCR5P32302 372 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MAPRE1Q15691 268 aaKnown RBP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 INTS6LQ5JSJ4 861 aaKnown RBP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CYP4A22Q5TCH4 519 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 OVOS1Q6IE37 1185 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FUT10Q6P4F1 479 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PHLDB2Q86SQ0 1253 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FIBCD1Q8N539 461 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 LRRN4CLQ8ND94 238 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TJP2Q9UDY2 1190 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SF3B1O75533 1304 aaKnown RBP eCLIP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MYBPHLA2RUH7 354 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CARNS1A5YM72 827 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 E5RJQ4 531 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TULP2O00295 520 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 DYNC1I1O14576 645 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 NPR3P17342 541 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ADORA2BP29275 332 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RFC1P35251 1148 aaPredicted RBP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SLC6A3Q01959 620 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ELAVL2Q12926 359 aaKnown RBP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MRPL58Q14197 206 aaKnown RBP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MDH1BQ5I0G3 518 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 LRRC38Q5VT99 294 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 UBXN4Q92575 508 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ALG3Q92685 438 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GOLGA1Q92805 767 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CAPZA3Q96KX2 299 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MCEEQ96PE7 176 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PSMB7Q99436 277 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 UBE2OQ9C0C9 1292 aaKnown RBP13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CSNK1G1Q9HCP0 422 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ST7Q9NRC1 585 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TMEM59LQ9UK28 342 aa13.5□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 VWA8A3KMH1 1905 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TMEM110-MUSTN1A8MSY1 372 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GRXCR1A8MXD5 290 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PSTPIP1O43586 416 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 BMP8BP34820 402 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RABGGTBP53611 331 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ZNF252P-AS1Q0IIN9 211 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CCDC181Q5TID7 509 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 OLFML1Q6UWY5 402 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SPATA4Q8NEY3 305 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KRT35Q92764 455 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KHSRPQ92945 711 aaKnown RBP eCLIP13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PCED1BQ96HM7 432 aa13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 OXCT2Q9BYC2 517 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SPG21Q9NZD8 308 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms