RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 FAM153BP0C7A2 387 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 TSPAN8P19075 237 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 STAT5BP51692 787 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 CARTPTQ16568 116 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 FAM153CQ494X1 144 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 BTN2A1Q7KYR7 527 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 AHI1Q8N157 1196 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 TFB1MQ8WVM0 346 aaKnown RBP13.09□□□□□ -0.31
USP38-201ENST00000307017 GRAMD1AQ96CP6 724 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ACOX2Q99424 681 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 TBCDQ9BTW9 1192 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 MTMR12Q9C0I1 747 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 KIAA1586Q9HCI6 787 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 MRGBPQ9NV56 204 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 PADI4Q9UM07 663 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ZBTB11O95625 1053 aaPredicted RBP13.09□□□□□ -0.31
USP38-201ENST00000307017 CATSPER1Q8NEC5 780 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ADAM32Q8TC27 787 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 CAPSLQ8WWF8 208 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 STK33Q9BYT3 514 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 POLBP06746 335 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 CORO7P57737 925 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 HPCAP84074 193 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ACOT1Q86TX2 421 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 GATAD2AQ86YP4 633 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 SRP54P61011 504 aaKnown RBP13.09□□□□□ -0.31
USP38-201ENST00000307017 NAB2Q15742 525 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 KBTBD2Q8IY47 623 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 PYDC1Q8WXC3 89 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 MTO1Q9Y2Z2 717 aaKnown RBP13.09□□□□□ -0.31
USP38-201ENST00000307017 POLD3Q15054 466 aaPredicted RBP13.08□□□□□ -0.31
USP38-201ENST00000307017 RNF181Q9P0P0 153 aa13.08□□□□□ -0.31
USP38-201ENST00000307017 ZNF197O14709 1029 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 GPD1P21695 349 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 PKNOX1P55347 436 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 DGCR6Q14129 220 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 RASA2Q15283 850 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 PTPN20Q4JDL3 420 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 DEFB107AQ8IZN7 70 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 SCFD1Q8WVM8 642 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 PRG3Q9Y2Y8 225 aaPredicted RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 FGFR1P11362 822 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 ETS2P15036 469 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 RD3Q7Z3Z2 195 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 POLR1BQ9H9Y6 1135 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 COPG1Q9Y678 874 aaKnown RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 UBXN8O00124 270 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 GGPS1O95749 300 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 SNRPAP09012 282 aaKnown RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 DNAJB2P25686 324 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 PSMA4P25789 261 aaKnown RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 EPHB2P29323 1055 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 HERVK_113P62684 666 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 PRKCEQ02156 737 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 TTLL6Q8N841 843 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 TMEM150BA6NC51 233 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 C16orf96A6NNT2 1141 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 AP5Z1O43299 807 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 BBOX1O75936 387 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 CBX6O95503 412 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 C6orf222P0C671 652 aaPredicted RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 DARSP14868 501 aaKnown RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 CDH24Q86UP0 819 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 IZUMO1Q8IYV9 350 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 HDAC7Q8WUI4 952 aa13.08□□□□□ -0.32
USP38-201ENST00000307017 KCTD14Q9BQ13 255 aaPredicted RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 TDRKHQ9Y2W6 561 aaKnown RBP13.08□□□□□ -0.32
USP38-201ENST00000307017 PDZK1P1A8MUH7 402 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TOMM70O94826 608 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 NFICP08651 508 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ITIH2P19823 946 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 CRADDP78560 199 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 IPPQ9Y573 584 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 KRT16P08779 473 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 KLRK1P26718 216 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ABCE1P61221 599 aaKnown RBP13.07□□□□□ -0.32
USP38-201ENST00000307017 PPATQ06203 517 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 EPS8Q12929 822 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 PCYOX1LQ8NBM8 494 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 COA1Q9GZY4 146 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TRIM39Q9HCM9 518 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 HOXC10Q9NYD6 342 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 KIAA0556O60303 1618 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 OPLAHO14841 1288 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ITGA3P26006 1051 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 EMC2Q15006 297 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 DET1Q7L5Y6 550 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TFAP2DQ7Z6R9 452 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 STRA8Q7Z7C7 330 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ATG16L2Q8NAA4 619 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 FOPNLQ96NB1 174 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 KCNK16Q96T55 309 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms