RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ATP1A3P13637 1013 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 GJA1P17302 382 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ACO1P21399 889 aaKnown RBP11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DDX6P26196 483 aaKnown RBP eCLIP11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CCR2P41597 374 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SLC5A3P53794 718 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CACNA2D1P54289 1103 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 BCAT1P54687 386 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CYP4F8P98187 520 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MTMR3Q13615 1198 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 IQCB1Q15051 598 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 GOLGA7BQ2TAP0 167 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 GPR158Q5T848 1215 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PAQR9Q6ZVX9 377 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 LUZP1Q86V48 1076 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 RNF135Q8IUD6 432 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 NUP93Q8N1F7 819 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SHKBP1Q8TBC3 707 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FBXO32Q969P5 355 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MCRS1Q96EZ8 462 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 LRRC3Q9BY71 257 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PNPLA8Q9NP80 782 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SIX2Q9NPC8 291 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 IGSF9Q9P2J2 1179 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ZMYM5Q9UJ78 669 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DNAJC12Q9UKB3 198 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TSPAN16Q9UKR8 245 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DAAM1Q9Y4D1 1078 aa11.64□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TNFRSF10AO00220 468 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MED7O43513 233 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 HMGA1P17096 107 aaKnown RBP11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 YWHAQP27348 245 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 GNA15P30679 374 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PPP3CCP48454 512 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 APBA1Q02410 837 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 BST2Q10589 180 aaKnown RBP11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KCNMA1Q12791 1236 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SYCP1Q15431 976 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KLHDC7AQ5VTJ3 777 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CLEC20AQ6ZU45 233 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 GAREM2Q75VX8 874 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PDZD8Q8NEN9 1154 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 NEK11Q8NG66 645 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 NXPE3Q969Y0 559 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MYRFLQ96LU7 910 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KCNK16Q96T55 309 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SMOQ99835 787 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DUSP16Q9BY84 665 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 HSD3B7Q9H2F3 369 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FBXO44Q9H4M3 255 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CSNK1G1Q9HCP0 422 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TRPC7Q9HCX4 862 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PLCB1Q9NQ66 1216 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FAM207AQ9NSI2 230 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TMEM30AQ9NV96 361 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 COMMD8Q9NX08 183 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TRPM5Q9NZQ8 1165 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 LIMD1Q9UGP4 676 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 FHOD1Q9Y613 1164 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 UNC80Q8N2C7 3258 aa11.63□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TICRRQ7Z2Z1 1910 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 M0QYV0 167 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DPYSL4O14531 572 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 THAP12O43422 761 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MOSPD3O75425 235 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 BEST1O76090 585 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SETSIPP0DME0 302 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 UCHL3P15374 230 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 AVPR1AP37288 418 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PDE6CP51160 858 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ZNF132P52740 706 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PTK2Q05397 1052 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 PTPN21Q16825 1174 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ANKRD52Q8NB46 1076 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ZSCAN18Q8TBC5 510 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 OVCA2Q8WZ82 227 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SHC3Q92529 594 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SPAG5Q96R06 1193 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TTLL2Q9BWV7 592 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TASP1Q9H6P5 420 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 IL21Q9HBE4 155 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ZFP14Q9HCL3 533 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 CD320Q9NPF0 282 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 MUTYHQ9UIF7 546 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 SORCS3Q9UPU3 1222 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 NUMBLQ9Y6R0 609 aa11.62□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 KIF26AQ9ULI4 1882 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TRAV19A0A0A6YYK7 116 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 LRRC10BA6NIK2 292 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 RNF225M0QZC1 329 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 O00370 1275 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 XPO1O14980 1071 aaKnown RBP11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 DCXO43602 365 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TADA3O75528 432 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 ABL1P00519 1130 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 F11P03951 625 aa11.61□□□□□ -0.55
CSPG4P2Y-201ENST00000306853 TPM3P06753 285 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms