RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 A8MXQ7 604 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 PAPSS1O43252 624 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 RIPK2O43353 540 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 GAS8O95995 478 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 KRT7P08729 469 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 ETS1P14921 441 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CCND3P30281 292 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 GNL1P36915 607 aaPredicted RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 ADCY8P40145 1251 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 ATP1A2P50993 1020 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 IRAK1P51617 712 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CALCOCO2Q13137 446 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 STILQ15468 1287 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CCDC142Q17RM4 750 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 MFSD14CQ5VZR4 134 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 LRRC31Q6UY01 552 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 KDM7AQ6ZMT4 941 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 SERINC5Q86VE9 423 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 SLC35B2Q8TB61 432 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CFAP57Q96MR6 1250 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 PPP1R10Q96QC0 940 aaKnown RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 FAM129AQ9BZQ8 928 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 CENPHQ9H3R5 247 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 MTRF1LQ9UGC7 380 aaKnown RBP6.88□□□□□ -1.31
USP47-201ENST00000305481 USP18Q9UMW8 372 aa6.88□□□□□ -1.31
USP47-201ENST00000305481 SEPT4O43236 478 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CTSHP09668 335 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ATF2P15336 505 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 PDGFRAP16234 1089 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 GPD1P21695 349 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ACTN2P35609 894 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CETN2P41208 172 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 MGAT3Q09327 533 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ACAP1Q15027 740 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ARHGAP17Q68EM7 881 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CCSAPQ6IQ19 270 aaPredicted RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 ALLCQ8N6M5 410 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 NKD2Q969F2 451 aaPredicted RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 CNPY3Q9BT09 278 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 DDX23Q9BUQ8 820 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 ADAM33Q9BZ11 813 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 C10orf88Q9H8K7 445 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 AGO3Q9H9G7 860 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 TMEM88BA6NKF7 163 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CAND2O75155 1236 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ATP2C2O75185 946 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ENDOD1O94919 500 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 TFE3P19532 575 aaPredicted RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 NR1D1P20393 614 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 PCK1P35558 622 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 RPL34P49207 117 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 TAF6P49848 677 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ARSEP51690 589 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 VCPP55072 806 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 DYNLT1P63172 113 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 SLMAPQ14BN4 828 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 HADHQ16836 314 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 OSTM1Q86WC4 334 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CCDC25Q86WR0 208 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 UHMK1Q8TAS1 419 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 CLEC4CQ8WTT0 213 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 STK32AQ8WU08 396 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 TSPAN18Q96SJ8 248 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 TMEM121Q9BTD3 319 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 TRAIPQ9BWF2 469 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CAPS2Q9BXY5 557 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 DNAJC17Q9NVM6 304 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 ASNSD1Q9NWL6 643 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 MIOSQ9NXC5 875 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ANAPC5Q9UJX4 755 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ZNF148Q9UQR1 794 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 DRG1Q9Y295 367 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 EFR3BQ9Y2G0 817 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 TRPV2Q9Y5S1 764 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CST8O60676 142 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 RPS6KA5O75582 802 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ASGR1P07306 291 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ELNP15502 786 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 TKTP29401 623 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 LRPAP1P30533 357 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 PNPLA4P41247 253 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CDR1P51861 262 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 EIF3BP55884 814 aaKnown RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 SLC6A3Q01959 620 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 MMRN1Q13201 1228 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 KCNA10Q16322 511 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 P3H1Q32P28 736 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 KRT71Q3SY84 523 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 DENND2CQ68D51 928 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 HIBCHQ6NVY1 386 aaPredicted RBP6.87□□□□□ -1.31
USP47-201ENST00000305481 FOXR1Q6PIV2 292 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 BBS12Q6ZW61 710 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ZNF365Q70YC5 407 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 CCDC89Q8N998 374 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 ANKRD52Q8NB46 1076 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 APPL2Q8NEU8 664 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 HSPH1Q92598 858 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 LPPQ93052 612 aa6.87□□□□□ -1.31
USP47-201ENST00000305481 MIS12Q9H081 205 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms