RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 BARX2Q9UMQ3 279 aaPredicted RBP10.48□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PHTF1Q9UMS5 762 aa10.48□□□□□ -0.73
TNFRSF11B-201ENST00000297350 DERAQ9Y315 318 aa10.48□□□□□ -0.73
TNFRSF11B-201ENST00000297350 IQANK1A0A1B0GTG1 560 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZNF189O75820 626 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CNMDO75829 334 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 DDNO94850 711 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 C22orf31O95567 290 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ERBB2P04626 1255 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZSCAN5DPP0CG00 497 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 GPD1P21695 349 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TGM2P21980 687 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CCND1P24385 295 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SSTR3P32745 418 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RPL22P35268 128 aaKnown RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RBP5P82980 135 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 NOMO1Q15155 1222 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZKSCAN8Q15776 578 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PKN2Q16513 984 aaKnown RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZNF394Q53GI3 561 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TXNRD3NBQ6F5E7 133 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CGB2Q6NT52 195 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 EFCAB12Q6NXP0 572 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 LCLAT1Q6UWP7 414 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 USP50Q70EL3 339 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 RFX6Q8HWS3 928 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZDHHC17Q8IUH5 632 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 C1orf127Q8N9H9 656 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZC3H15Q8WU90 426 aaKnown RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CPXM1Q96SM3 734 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ADPGKQ9BRR6 497 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MAK16Q9BXY0 300 aaKnown RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 LRMDAQ9H2I8 198 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ZWILCHQ9H900 591 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 METTL5Q9NRN9 209 aaKnown RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PAK5Q9P286 719 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 USP18Q9UMW8 372 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 KCNH4Q9UQ05 1017 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MICAL2O94851 1124 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 KRT19P08727 400 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 STAG3L1P0CL83 205 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CXCL8P10145 99 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TROVE2P10155 538 aaKnown RBP eCLIP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 OSBPP22059 807 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MIPP30301 263 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 NF2P35240 595 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MAP2K2P36507 400 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MSH2P43246 934 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MAGEA6P43360 314 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 GPX6P59796 221 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SEPT7Q16181 437 aaKnown RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 BOLA3Q53S33 107 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SLC45A4Q5BKX6 768 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 GADL1Q6ZQY3 521 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TBC1D1Q86TI0 1168 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CHSY1Q86X52 802 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ECHDC2Q86YB7 292 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PALM2Q8IXS6 379 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 LRRC71Q8N4P6 559 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 FITM2Q8N6M3 262 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ARFGAP1Q8N6T3 406 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 JOSD2Q8TAC2 188 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 DCPSQ96C86 337 aaKnown RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 LRRC39Q96DD0 335 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 NLRP4Q96MN2 994 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 LRRC37BQ96QE4 947 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MMP19Q99542 508 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SYT17Q9BSW7 474 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ASCC2Q9H1I8 757 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CD248Q9HCU0 757 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SAR1AQ9NR31 198 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 POLIQ9UNA4 740 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 AGAP1Q9UPQ3 857 aa10.47□□□□□ -0.73
TNFRSF11B-201ENST00000297350 M0QYV0 167 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 IGF2BP3O00425 579 aaKnown RBP eCLIP10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ARIH2O95376 493 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ETS1P14921 441 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 YBX3P16989 372 aaKnown RBP eCLIP10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 IL1R2P27930 398 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SCNN1AP37088 669 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 GPD2P43304 727 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 ATP11AP98196 1134 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PPIL2Q13356 520 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 TMEM132DQ14C87 1099 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 FASTKD3Q14CZ7 662 aaKnown RBP10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 HSDL1Q3SXM5 330 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PRAMEF18Q5VWM3 479 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 FASTKD5Q7L8L6 764 aaKnown RBP10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SULF1Q8IWU6 871 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CXorf38Q8TB03 319 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 SH3TC2Q8TF17 1288 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 STK32AQ8WU08 396 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CNKSR2Q8WXI2 1034 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 EMID1Q96A84 441 aaPredicted RBP10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 HAUS1Q96CS2 278 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 FGD4Q96M96 766 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 PAFAH2Q99487 392 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 CYTH4Q9UIA0 394 aa10.46□□□□□ -0.73
TNFRSF11B-201ENST00000297350 MCM8Q9UJA3 840 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms