RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 KNOP1Q1ED39 458 aaKnown RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 SWI5Q1ZZU3 235 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 DGKKQ5KSL6 1271 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 SEPT12Q8IYM1 358 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 METTL13Q8N6R0 699 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF366Q8N895 744 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 TBC1D16Q8TBP0 767 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 GATA6Q92908 595 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 HGH1Q9BTY7 390 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 FOXP3Q9BZS1 431 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 TP63Q9H3D4 680 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 KIAA0232Q92628 1395 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 C9orf84Q5VXU9 1444 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 RIPK2O43353 540 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 VARSP26640 1264 aaKnown RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 PEX2P28328 305 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 NUDT2P50583 147 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 EFR3AQ14156 821 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 IQSEC1Q6DN90 963 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF555Q8NEP9 628 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF486Q96H40 463 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 MKRN2Q9H000 416 aaKnown RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 NDFIP2Q9NV92 336 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 INTS13Q9NVM9 706 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 ACTR3BQ9P1U1 418 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 KLHL42Q9P2K6 505 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 PSMC3IPQ9P2W1 217 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 B4E1Z4 1266 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF862O60290 1169 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 TBC1D4O60343 1298 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 EYA4O95677 639 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 SQLEQ14534 574 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 SLC9A5Q14940 896 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 FAM83BQ5T0W9 1011 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 CLEC4FQ8N1N0 589 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 SLC35B4Q969S0 331 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 SLC13A1Q9BZW2 595 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 KLC2Q9H0B6 622 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF335Q9H4Z2 1342 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 A8MX80 341 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 YES1P07947 543 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 MAPK4P31152 587 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 MAPK7Q13164 816 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 HERC3Q15034 1050 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 WDR72Q3MJ13 1102 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 UBE2UQ5VVX9 321 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 DCDC5Q6ZRR9 648 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 CLNKQ7Z7G1 428 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 PDIK1LQ8N165 341 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 FAR2Q96K12 515 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 TSEN34Q9BSV6 310 aaKnown RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 ASPSCR1Q9BZE9 553 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 CATSPERZQ9NTU4 200 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 TAS2R1Q9NYW7 299 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
SNIP1-201ENST00000296215 POLHQ9Y253 713 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 ATP10AO60312 1499 aa12.16□□□□□ -0.46
SNIP1-201ENST00000296215 SOS2Q07890 1332 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 APOL3O95236 402 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 SNAP29O95721 258 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 ETV1P50549 477 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 EIF3EP60228 445 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 MRPS22P82650 360 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PRKCQQ04759 706 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PDIA2Q13087 525 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 ACVR2BQ13705 512 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 AUHQ13825 339 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 SLC18A3Q16572 532 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 CYP2A13Q16696 494 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 NEPROQ6NW34 567 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 VASH1Q7L8A9 365 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 KRT28Q7Z3Y7 464 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 FBXW8Q8N3Y1 598 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 STX19Q8N4C7 294 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 GSTCDQ8NEC7 633 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 ZFP28Q8NHY6 868 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 ACTRT1Q8TDG2 376 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 CDC42EP4Q9H3Q1 356 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 HMGXB4Q9UGU5 601 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 SERPINB13Q9UIV8 391 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 MAP3K15Q6ZN16 1313 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 SGK1O00141 431 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 CPNE3O75131 537 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PGDP52209 483 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 EXOSC10Q01780 885 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 MAP3K10Q02779 954 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PKN1Q16512 942 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 CRY1Q16526 586 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 SLCO6A1Q86UG4 719 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 AHI1Q8N157 1196 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 TDRD5Q8NAT2 981 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 YME1L1Q96TA2 773 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms