RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 PARD3BQ8TEW8 1205 aa26.92■■□□□ 1.9
U2AF1-201ENST00000291552 PARD6AQ9NPB6 346 aa26.92■■□□□ 1.9
U2AF1-201ENST00000291552 EXOC1Q9NV70 894 aa26.92■■□□□ 1.9
U2AF1-201ENST00000291552 NXF1Q9UBU9 619 aaKnown RBP26.92■■□□□ 1.9
U2AF1-201ENST00000291552 WNT6Q9Y6F9 365 aa26.92■■□□□ 1.9
U2AF1-201ENST00000291552 NCOR2Q9Y618 2525 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 HRO43593 1189 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 FAM163BP0C2L3 166 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 PTPN1P18031 435 aaKnown RBP26.91■■□□□ 1.9
U2AF1-201ENST00000291552 CMA1P23946 247 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 CLDN10P78369 228 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 ZXDBP98169 803 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 HEATR6Q6AI08 1181 aaKnown RBP26.91■■□□□ 1.9
U2AF1-201ENST00000291552 DENND5BQ6ZUT9 1274 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 ERMP1Q7Z2K6 904 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 GOLGA5Q8TBA6 731 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 SH3RF2Q8TEC5 729 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 CEP295NLQ96MC4 621 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 ZNF518BQ9C0D4 1074 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 VRTNQ9H8Y1 702 aa26.91■■□□□ 1.9
U2AF1-201ENST00000291552 VNN1O95497 513 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 EGFP01133 1207 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 GJA4P35212 333 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 FOXK2Q01167 660 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 TRPC3Q13507 836 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 CC2D1AQ6P1N0 951 aaPredicted RBP26.9■■□□□ 1.9
U2AF1-201ENST00000291552 SLC9A9Q8IVB4 645 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 TTC16Q8NEE8 873 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 OSCP1Q8WVF1 389 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 C8orf48Q96LL4 319 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 B3GNT5Q9BYG0 378 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 ECT2Q9H8V3 914 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 DUS2Q9NX74 493 aaKnown RBP26.9■■□□□ 1.9
U2AF1-201ENST00000291552 DLL3Q9NYJ7 618 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 ARHGAP26Q9UNA1 814 aa26.9■■□□□ 1.9
U2AF1-201ENST00000291552 CLDN5O00501 218 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 TRIM66O15016 1216 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 C4BPAP04003 597 aaKnown RBP26.89■■□□□ 1.9
U2AF1-201ENST00000291552 PRR29P0C7W0 189 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 TCF3P15923 654 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 ATICP31939 592 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 RAP1GAPP47736 663 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 NOP14P78316 857 aaKnown RBP26.89■■□□□ 1.9
U2AF1-201ENST00000291552 DLG4P78352 724 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 KCNB1Q14721 858 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 EML3Q32P44 896 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 LONP2Q86WA8 852 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 FSIP1Q8NA03 581 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 B3GALNT2Q8NCR0 500 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 TMEM174Q8WUU8 243 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 EZH1Q92800 747 aaPredicted RBP26.89■■□□□ 1.9
U2AF1-201ENST00000291552 SYAP1Q96A49 352 aaPredicted RBP26.89■■□□□ 1.9
U2AF1-201ENST00000291552 SDCBP2Q9H190 292 aa26.89■■□□□ 1.9
U2AF1-201ENST00000291552 A8MXQ7 604 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 HDCP19113 662 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 ANXA13P27216 316 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 HOXA6P31267 233 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 CDH8P55286 799 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 GRSF1Q12849 480 aaKnown RBP eCLIP26.88■■□□□ 1.89
U2AF1-201ENST00000291552 ZNF699Q32M78 642 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 PRR23BQ6ZRT6 265 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 CPA6Q8N4T0 437 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 SPATA32Q96LK8 384 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 LINC00597Q9H2U6 94 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 POLR3BQ9NW08 1133 aaPredicted RBP26.88■■□□□ 1.89
U2AF1-201ENST00000291552 TRPM5Q9NZQ8 1165 aa26.88■■□□□ 1.89
U2AF1-201ENST00000291552 FAM237AA0A1B0GTK4 181 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 ZNF840PA6NDX5 716 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 PHACTR2O75167 634 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 NR3C1P04150 777 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 IFNAR2P48551 515 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 GALK1P51570 392 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 PSMD2Q13200 908 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 BIRC3Q13489 604 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 NCOA4Q13772 614 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 RSPO4Q2I0M5 234 aaPredicted RBP26.87■■□□□ 1.89
U2AF1-201ENST00000291552 LAIR1Q6GTX8 287 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 SCARA5Q6ZMJ2 495 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 ELOVL4Q9GZR5 314 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 USP25Q9UHP3 1055 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 GMEB2Q9UKD1 530 aa26.87■■□□□ 1.89
U2AF1-201ENST00000291552 PDXKO00764 312 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 RNF40O75150 1001 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 OLFM2O95897 454 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 NDUFA8P51970 172 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 SIM2Q14190 667 aaPredicted RBP26.86■■□□□ 1.89
U2AF1-201ENST00000291552 C1orf220Q5T0J3 134 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 PAQR9Q6ZVX9 377 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 WDR5BQ86VZ2 330 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 SECISBP2LQ93073 1101 aaKnown RBP26.86■■□□□ 1.89
U2AF1-201ENST00000291552 ATP2A3Q93084 1043 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 P2RY13Q9BPV8 354 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 RNF38Q9H0F5 515 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 RAB23Q9ULC3 237 aa26.86■■□□□ 1.89
U2AF1-201ENST00000291552 LEFTY2O00292 366 aa26.85■■□□□ 1.89
U2AF1-201ENST00000291552 OAS1P00973 400 aaKnown RBP26.85■■□□□ 1.89
U2AF1-201ENST00000291552 RPN1P04843 607 aaKnown RBP26.85■■□□□ 1.89
U2AF1-201ENST00000291552 KRT85P78386 507 aa26.85■■□□□ 1.89
U2AF1-201ENST00000291552 TAF10Q12962 218 aa26.85■■□□□ 1.89
U2AF1-201ENST00000291552 PUM1Q14671 1186 aaKnown RBP eCLIP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms