RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 TRIM68Q6AZZ1 485 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 CC2D1AQ6P1N0 951 aaPredicted RBP11.15□□□□□ -0.62
SNF8-201ENST00000290330 Q6ZS52 159 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 SV2AQ7L0J3 742 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 SPEM1Q8N4L4 309 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 ARL14EPQ8N8R7 260 aaPredicted RBP11.15□□□□□ -0.62
SNF8-201ENST00000290330 B3GALNT2Q8NCR0 500 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 CHFRQ96EP1 664 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 TTLL2Q9BWV7 592 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 B3GNT5Q9BYG0 378 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 FAM126AQ9BYI3 521 aaPredicted RBP11.15□□□□□ -0.62
SNF8-201ENST00000290330 ZNF518BQ9C0D4 1074 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 ELOVL4Q9GZR5 314 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 SDCBP2Q9H190 292 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 EBF3Q9H4W6 596 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 SMYD3Q9H7B4 428 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 TRPC7Q9HCX4 862 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 TMEM30AQ9NV96 361 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 MAPK8IP1Q9UQF2 711 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 FRMD4BQ9Y2L6 1034 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 CLDN5O00501 218 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 MAPK13O15264 365 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 AKAP3O75969 853 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 CKMP06732 381 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 ARSAP15289 507 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 HDCP19113 662 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 NR2F2P24468 414 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 RAP1GAPP47736 663 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 CXCL12P48061 93 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 SATB1Q01826 763 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 CCINQ13939 588 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 PPP2R5DQ14738 602 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 MTF1Q14872 753 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 ZNF77Q15935 545 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 SGSM1Q2NKQ1 1148 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 GUF1Q8N442 669 aaKnown RBP11.14□□□□□ -0.63
SNF8-201ENST00000290330 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 EHD2Q9NZN4 543 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 TRPM5Q9NZQ8 1165 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
SNF8-201ENST00000290330 RIF1Q5UIP0 2472 aaKnown RBP11.14□□□□□ -0.63
SNF8-201ENST00000290330 FANCMQ8IYD8 2048 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 CLSTN1O94985 981 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 MBD3O95983 291 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
SNF8-201ENST00000290330 TCF3P15923 654 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 PFKLP17858 780 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 PPP3CCP48454 512 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 VAMP7P51809 220 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 NRLP54845 237 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 ZXDBP98169 803 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 USP4Q13107 963 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 PDGFRLQ15198 375 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 ZCWPW2Q504Y3 356 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 TMEM196Q5HYL7 178 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 SCARA5Q6ZMJ2 495 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 PAQR9Q6ZVX9 377 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 SYNPOQ8N3V7 929 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 TTC16Q8NEE8 873 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 SH3RF2Q8TEC5 729 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 OSCP1Q8WVF1 389 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 RUBCNQ92622 972 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 TAF4BQ92750 862 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 TNIP3Q96KP6 325 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 KCNK16Q96T55 309 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 EPC1Q9H2F5 836 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 DUS2Q9NX74 493 aaKnown RBP11.13□□□□□ -0.63
SNF8-201ENST00000290330 ARHGAP26Q9UNA1 814 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 DENND4CQ5VZ89 1909 aa11.13□□□□□ -0.63
SNF8-201ENST00000290330 OBSL1O75147 1896 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 VPS13AQ96RL7 3174 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 K7ESF4 209 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 TRDMT1O14717 391 aaKnown RBP11.12□□□□□ -0.63
SNF8-201ENST00000290330 PAPSS2O95340 614 aaPredicted RBP11.12□□□□□ -0.63
SNF8-201ENST00000290330 OLFM2O95897 454 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 HLA-DRAP01903 254 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 P4HA1P13674 534 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 RPL13P26373 211 aaKnown RBP11.12□□□□□ -0.63
SNF8-201ENST00000290330 PSMC2P35998 433 aaKnown RBP11.12□□□□□ -0.63
SNF8-201ENST00000290330 ASPAP45381 313 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 GCLMP48507 274 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 PDE6CP51160 858 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 AMPD2Q01433 879 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 PPP3CAQ08209 521 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 GRSF1Q12849 480 aaKnown RBP eCLIP11.12□□□□□ -0.631e-7■■■□□ 16.4
SNF8-201ENST00000290330 TAF10Q12962 218 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 ADAM9Q13443 819 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 KLHL40Q2TBA0 621 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 FSTL4Q6MZW2 842 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 INTS8Q75QN2 995 aaKnown RBP11.12□□□□□ -0.63
SNF8-201ENST00000290330 ACOT1Q86TX2 421 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 FAM35AQ86V20 835 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 FAM186BQ8IYM0 893 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 FUKQ8N0W3 1084 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 FMR1NBQ8N0W7 255 aaPredicted RBP11.12□□□□□ -0.63
SNF8-201ENST00000290330 NUP93Q8N1F7 819 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 CRYBG2Q8N1P7 616 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 DCLK2Q8N568 766 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms