RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RNASEH1O60930 286 aaKnown RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 PLEKHA8P1O95397 391 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 MRNIPQ6NTE8 343 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 C3orf62Q6ZUJ4 267 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 ATG16L2Q8NAA4 619 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 NEK6Q9HC98 313 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 VTI1BQ9UEU0 232 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 POLG2Q9UHN1 485 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 PIN4Q9Y237 131 aaKnown RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 PRKCBP05771 671 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 TARSP26639 723 aaKnown RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 MAGEA4P43358 317 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 ILF2Q12905 390 aaKnown RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 WDR72Q3MJ13 1102 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 TIMM50Q3ZCQ8 353 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 KCNT1Q5JUK3 1230 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 LAYNQ6UX15 382 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 DCP1BQ8IZD4 617 aaKnown RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 SLC35G2Q8TBE7 412 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 RIN2Q8WYP3 895 aaPredicted RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 APBB2Q92870 758 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 SEPT5Q99719 369 aaPredicted RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 CD209Q9NNX6 404 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 GGT7Q9UJ14 662 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 TAF4O00268 1085 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 TIMM44O43615 452 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 PDGFRAP16234 1089 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 RAB2AP61019 212 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 NCOA4Q13772 614 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 POLD3Q15054 466 aaPredicted RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 TIGD7Q6NT04 549 aaPredicted RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 BARGINQ6ZT62 677 aa9.03□□□□□ -0.96
NIPBL-201ENST00000282516 ZCCHC7Q8N3Z6 543 aaKnown RBP9.03□□□□□ -0.96
NIPBL-201ENST00000282516 MGRN1O60291 552 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 AKIRIN2Q53H80 203 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 SEL1L3Q68CR1 1132 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 CLCC1Q96S66 551 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 BDH2Q9BUT1 245 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 FRMD8P1Q9BZ68 369 aaPredicted RBP9.02□□□□□ -0.96
NIPBL-201ENST00000282516 ZNF304Q9HCX3 659 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 RAD54BQ9Y620 910 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 E2F8A0AVK6 867 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 TRIM49D1C9J1S8 452 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 ACADLP28330 430 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 SERPINB5P36952 375 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 HPCAL1P37235 193 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 ATP1A4Q13733 1029 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 UCMAQ8WVF2 138 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 NOD2Q9HC29 1040 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 SLC40A1Q9NP59 571 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 NMRK2Q9NPI5 230 aa9.02□□□□□ -0.96
NIPBL-201ENST00000282516 CASZ1Q86V15 1759 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 FAM20BO75063 409 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 KCNA6P17658 529 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 ZNF669Q96BR6 464 aaPredicted RBP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 EMILIN2Q9BXX0 1053 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 DAPK2Q9UIK4 370 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 LNPEPQ9UIQ6 1025 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 TTC26A0AVF1 554 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 UBE2QL1A1L167 161 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 TADA2AO75478 443 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 PHKG2P15735 406 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 EXOSC10Q01780 885 aaKnown RBP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 SV2CQ496J9 727 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 TMEM26Q6ZUK4 368 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 ULK2Q8IYT8 1036 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 MNTQ99583 582 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 MYO18AQ92614 2054 aaKnown RBP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 RP1L1Q8IWN7 2480 aaPredicted RBP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 PDXKO00764 312 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 CALB2P22676 271 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 PTGER2P43116 358 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 VAC14Q08AM6 782 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 DGUOKQ16854 277 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 MIEF2Q96C03 454 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 SMIM22K7EJ46 135 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 MAGEB18Q96M61 343 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 TPST1O60507 370 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 PABPC1P11940 636 aaKnown RBP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 PAICSP22234 425 aaKnown RBP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 USP11P51784 963 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 EZH2Q15910 746 aaKnown RBP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 THOC7Q6I9Y2 204 aaKnown RBP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 DENND1BQ6P3S1 775 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 SLITRK1Q96PX8 696 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 CLPBQ9H078 707 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.02□□□□□ -0.97
NIPBL-201ENST00000282516 ATP6V1HQ9UI12 483 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 O00370 1275 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 CYP26A1O43174 497 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 PSMB9P28065 219 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 JAMLQ86YT9 394 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 SLC22A9Q8IVM8 553 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 ZNF671Q8TAW3 534 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 WDR24Q96S15 920 aa9.02□□□□□ -0.97
NIPBL-201ENST00000282516 TRPM5Q9NZQ8 1165 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms