RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 EBF3Q9H4W6 596 aa20.66■□□□□ 0.9
MSGN1-201ENST00000281047 RIF1Q5UIP0 2472 aaKnown RBP20.66■□□□□ 0.9
MSGN1-201ENST00000281047 DENND4CQ5VZ89 1909 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 OBSL1O75147 1896 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 C2orf78A6NCI8 922 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 GOLGA6L4A6NEF3 574 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 HDCP19113 662 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 CDH8P55286 799 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 MTF1Q14872 753 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 TRIM68Q6AZZ1 485 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 INTS8Q75QN2 995 aaKnown RBP20.65■□□□□ 0.9
MSGN1-201ENST00000281047 SV2AQ7L0J3 742 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 EXOC4Q96A65 974 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 SLC22A12Q96S37 553 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 B3GNT5Q9BYG0 378 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 ZNF518BQ9C0D4 1074 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 HPS4Q9NQG7 708 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 RBM12Q9NTZ6 932 aaKnown RBP20.65■□□□□ 0.9
MSGN1-201ENST00000281047 GCNT4Q9P109 453 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 MAPK8IP1Q9UQF2 711 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 FAM186AA6NE01 2351 aa20.65■□□□□ 0.9
MSGN1-201ENST00000281047 PTPRZ1P23471 2315 aaPredicted RBP20.65■□□□□ 0.9
MSGN1-201ENST00000281047 LILRB5O75023 590 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 KRT13P13646 458 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 PIK3CAP42336 1068 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 RAP1GAPP47736 663 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 VAMP7P51809 220 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 USP46P62068 366 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 NUCB2P80303 420 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 USP4Q13107 963 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 ZNF77Q15935 545 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 CPA6Q8N4T0 437 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 TTC16Q8NEE8 873 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 OSCP1Q8WVF1 389 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 RUBCNQ92622 972 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 SLITRK1Q96PX8 696 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 DUS2Q9NX74 493 aaKnown RBP20.64■□□□□ 0.89
MSGN1-201ENST00000281047 ARHGAP26Q9UNA1 814 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 FANCMQ8IYD8 2048 aa20.64■□□□□ 0.89
MSGN1-201ENST00000281047 KIF26AQ9ULI4 1882 aaPredicted RBP20.64■□□□□ 0.89
MSGN1-201ENST00000281047 CLDN5O00501 218 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 TDGF1P13385 188 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 ARSAP15289 507 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 TCF3P15923 654 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 TRIM21P19474 475 aaKnown RBP20.63■□□□□ 0.89
MSGN1-201ENST00000281047 IFNAR2P48551 515 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 ENPEPQ07075 957 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 GRSF1Q12849 480 aaKnown RBP eCLIP20.63■□□□□ 0.89
MSGN1-201ENST00000281047 CCINQ13939 588 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 GAS6Q14393 721 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 FAM186BQ8IYM0 893 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 SUMF1Q8NBK3 374 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 RIN3Q8TB24 985 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 SH3RF2Q8TEC5 729 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 ATP2A3Q93084 1043 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 MED10Q9BTT4 135 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 IMPG2Q9BZV3 1241 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 RMND1Q9NWS8 449 aa20.63■□□□□ 0.89
MSGN1-201ENST00000281047 ZNF840PA6NDX5 716 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 AKAP3O75969 853 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 RTN3O95197 1032 aaPredicted RBP20.62■□□□□ 0.89
MSGN1-201ENST00000281047 PAPSS2O95340 614 aaPredicted RBP20.62■□□□□ 0.89
MSGN1-201ENST00000281047 ASS1P00966 412 aaKnown RBP20.62■□□□□ 0.89
MSGN1-201ENST00000281047 HLA-DRAP01903 254 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 PSMC2P35998 433 aaKnown RBP20.62■□□□□ 0.89
MSGN1-201ENST00000281047 CACNA2D1P54289 1103 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 SATB1Q01826 763 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 ADAM9Q13443 819 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 WDR44Q5JSH3 913 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 Q6ZS52 159 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 FAM35AQ86V20 835 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 SMARCD1Q96GM5 515 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 EPC1Q9H2F5 836 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 PTPRDP23468 1912 aa20.62■□□□□ 0.89
MSGN1-201ENST00000281047 OTOL1A6NHN0 477 aaPredicted RBP20.61■□□□□ 0.89
MSGN1-201ENST00000281047 TRDMT1O14717 391 aaKnown RBP20.61■□□□□ 0.89
MSGN1-201ENST00000281047 YWHAQP27348 245 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 TAF10Q12962 218 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 EDRF1Q3B7T1 1238 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 TMEM196Q5HYL7 178 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 C1orf220Q5T0J3 134 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 ACOT1Q86TX2 421 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 UNC93AQ86WB7 457 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 FMR1NBQ8N0W7 255 aaPredicted RBP20.61■□□□□ 0.89
MSGN1-201ENST00000281047 NUP93Q8N1F7 819 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 PDZD8Q8NEN9 1154 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 SECISBP2LQ93073 1101 aaKnown RBP20.61■□□□□ 0.89
MSGN1-201ENST00000281047 ELMO3Q96BJ8 720 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 SDCBP2Q9H190 292 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 ECT2Q9H8V3 914 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 DMAP1Q9NPF5 467 aaPredicted RBP20.61■□□□□ 0.89
MSGN1-201ENST00000281047 TMEM30AQ9NV96 361 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 NCDNQ9UBB6 729 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 WNT6Q9Y6F9 365 aa20.61■□□□□ 0.89
MSGN1-201ENST00000281047 ZNF638Q14966 1978 aaKnown RBP20.61■□□□□ 0.89
MSGN1-201ENST00000281047 ABL1P00519 1130 aa20.6■□□□□ 0.89
MSGN1-201ENST00000281047 TRIM49P0CI25 452 aa20.6■□□□□ 0.89
MSGN1-201ENST00000281047 TRIM49CP0CI26 452 aa20.6■□□□□ 0.89
MSGN1-201ENST00000281047 IFRD2Q12894 506 aaPredicted RBP20.6■□□□□ 0.89
MSGN1-201ENST00000281047 NR1H3Q13133 447 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms