RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SNX29Q8TEQ0 813 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 C8orf48Q96LL4 319 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 PSD2Q9BQI7 771 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CCDC77Q9BR77 488 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 HAUS8Q9BT25 410 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 PLA2G12BQ9BX93 195 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CALN1Q9BXU9 219 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 NUF2Q9BZD4 464 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 PI4KBQ9UBF8 816 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CDH7Q9ULB5 785 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 NENFQ9UMX5 172 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 SPATA31A5Q5VU36 1347 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 SPATA31A7Q8IWB4 1347 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 IRS4O14654 1257 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 RGS13O14921 159 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CLASP2O75122 1294 aaKnown RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 GCAP28676 217 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 COILP38432 576 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 IL6STP40189 918 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 STAT2P52630 851 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF135P52742 658 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 IRX4P78413 519 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 HIC1Q14526 733 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 STAT4Q14765 748 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 OXA1LQ15070 435 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 TRIP13Q15645 432 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 COBLL1Q53SF7 1204 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 C6orf52Q5T4I8 152 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CNNM4Q6P4Q7 775 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 HEATR4Q86WZ0 1026 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 ACMSDQ8TDX5 336 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 SNF8Q96H20 258 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 ZBED2Q9BTP6 218 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 TP63Q9H3D4 680 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 TACC3Q9Y6A5 838 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 TCRBV7S2A1N4TA0A589 114 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 H3BNX3 289 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 KLHL41O60662 606 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 GABBR2O75899 941 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 ATE1O95260 518 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 MYL2P10916 166 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 ADRA1DP25100 572 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 ETFBP38117 255 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF132P52740 706 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 NDST2P52849 883 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 GALCP54803 685 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 CLUL1Q15846 466 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 MOGQ16653 247 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 LSM12Q3MHD2 195 aaKnown RBP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 CYP4A22Q5TCH4 519 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 SLC15A4Q8N697 577 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 GANQ9H2C0 597 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 SMYD3Q9H7B4 428 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 C10orf88Q9H8K7 445 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 WHRNQ9P202 907 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 TRMT112Q9UI30 125 aaKnown RBP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 GNEQ9Y223 722 aaKnown RBP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 SQORQ9Y6N5 450 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 V9GY48 417 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 DOT1LQ8TEK3 1739 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 CFAP99D6REC4 459 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 ADAMTS3O15072 1205 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 TSPAN1O60635 241 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 UFL1O94874 794 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 PRKCAP17252 672 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 KRT15P19012 456 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 CD247P20963 164 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 CPOXP36551 454 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 C9orf72Q96LT7 481 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 C7orf25Q9BPX7 421 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 SHCBP1LQ9BZQ2 653 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 HIPK3Q9H422 1215 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 MANSC1Q9H8J5 431 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 FANCEQ9HB96 536 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 PCDH12Q9NPG4 1184 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 TAGLN3Q9UI15 199 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 A0A1W2PPM1 405 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 ERVV-1B6SEH8 477 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 KPNA4O00629 521 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 HSPA6P17066 643 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 SLC1A1P43005 524 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 TPTEP56180 551 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 WTAPQ15007 396 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 HP1BP3Q5SSJ5 553 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 AGAP9Q5VTM2 703 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 SEPT12Q8IYM1 358 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 LILRB1Q8NHL6 650 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-201ENST00000274071 TANKQ92844 425 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 DCLK3Q9C098 648 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 C1orf21Q9H246 121 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 C12orf4Q9NQ89 552 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 VPS45Q9NRW7 570 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 STK17AQ9UEE5 414 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 CDC14AQ9UNH5 594 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 ATP11BQ9Y2G3 1177 aa9.6□□□□□ -0.87
PDGFC-201ENST00000274071 NRAPQ86VF7 1730 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms