RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GTF2H1P32780 548 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 STX3Q13277 289 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 SKIV2LQ15477 1246 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 PRPF39Q86UA1 669 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 FAM111AQ96PZ2 611 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 PDE4DIPQ5VU43 2346 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 PRKCBP05771 671 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 KCNA2P16389 499 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 ADORA2AP29274 412 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 PEX5P50542 639 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CASP5P51878 434 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CCNHP51946 323 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 KCNA1Q09470 495 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CDO1Q16878 200 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 OR6B2Q6IFH4 312 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 RNF149Q8NC42 400 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 SCG3Q8WXD2 468 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 NGRNQ9NPE2 291 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 PRMT7Q9NVM4 692 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 NINJ2Q9NZG7 142 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 TLK1Q9UKI8 766 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 STRIP2Q9ULQ0 834 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 EXTL3O43909 919 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CAPN15O75808 1086 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CYP2C8P10632 490 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 FBXO16Q8IX29 292 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 PRELID2Q8N945 189 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 HAUS8Q9BT25 410 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 TBC1D10AQ9BXI6 508 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 VPS11Q9H270 941 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 MYH15Q9Y2K3 1946 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 PTDSS1P48651 473 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 ACOT2P49753 483 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 GTF2BQ00403 316 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 ROR2Q01974 943 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 FAM110CQ1W6H9 321 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CELF3Q5SZQ8 465 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 WLSQ5T9L3 541 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 RNF43Q68DV7 783 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 IQSEC1Q6DN90 963 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 ABHD15Q6UXT9 468 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 LRRC74BQ6ZQY2 392 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 PLPPR4Q7Z2D5 763 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 ABI1Q8IZP0 508 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 DNAAF3Q8N9W5 541 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CCNYQ8ND76 341 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 PARD3BQ8TEW8 1205 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CBWD1Q9BRT8 395 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 APOL6Q9BWW8 343 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 KCTD10Q9H3F6 313 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 ST6GALNAC4Q9H4F1 302 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 MID2Q9UJV3 735 aa12.03□□□□□ -0.48
CLSTN3-201ENST00000266546 GIPC1O14908 333 aa12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 MYL2P10916 166 aa12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 NFX1Q12986 1120 aaKnown RBP12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 CYLC2Q14093 348 aaPredicted RBP12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 SYCP2LQ5T4T6 812 aa12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 SCUBE1Q8IWY4 988 aa12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 SOCS4Q8WXH5 440 aa12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 GCOM2Q9BZD3 368 aaPredicted RBP12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 TMEM8AQ9HCN3 771 aa12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 RBAKQ9NYW8 714 aaPredicted RBP12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 PCYOX1Q9UHG3 505 aa12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 XPO7Q9UIA9 1087 aaKnown RBP12.02□□□□□ -0.48
CLSTN3-201ENST00000266546 ENTPD5O75356 428 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 ROR1Q01973 937 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 CYTH1Q15438 398 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 ZNF568Q3ZCX4 644 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 PPP6R3Q5H9R7 873 aaPredicted RBP12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 SPRYD7Q5W111 196 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 ARHGAP22Q7Z5H3 698 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 C12orf56Q8IXR9 622 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 E2F7Q96AV8 911 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.02□□□□□ -0.497e-7■■□□□ 12.6
CLSTN3-201ENST00000266546 ADCY3O60266 1144 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 PAEPP09466 180 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 CYP11B1P15538 503 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 ATP6V1C1P21283 382 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 MAP4K3Q8IVH8 894 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 CCDC60Q8IWA6 550 aaPredicted RBP12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 RNF34Q969K3 372 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 BTBD10Q9BSF8 475 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 UPF3AQ9H1J1 476 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 RHBDL2Q9NX52 303 aa12.02□□□□□ -0.49
CLSTN3-201ENST00000266546 KRT10P13645 584 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 FCGRTP55899 365 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 CCNG2Q16589 344 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 C2CD6Q53TS8 623 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 LDLRAD1Q5T700 205 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 CCDC117Q8IWD4 279 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms