RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 LBRQ14739 615 aaKnown RBP13.29□□□□□ -0.28
PRPF6-201ENST00000266079 LRRC26Q2I0M4 334 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 DCAF12L1Q5VU92 463 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 JADE1Q6IE81 842 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 ADAT2Q7Z6V5 191 aaKnown RBP13.29□□□□□ -0.28
PRPF6-201ENST00000266079 VPS36Q86VN1 386 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 MGARPQ8TDB4 240 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 ADAM2Q99965 735 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 CARD9Q9H257 536 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 HIPK3Q9H422 1215 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 RNPEPL1Q9HAU8 725 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 MTRF1LQ9UGC7 380 aaKnown RBP13.29□□□□□ -0.28
PRPF6-201ENST00000266079 IPPQ9Y573 584 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 RIPK2O43353 540 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 TMEM191BP0C7N4 346 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 UBXN11Q5T124 520 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 KRT39Q6A163 491 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 FAM43BQ6ZT52 329 aaPredicted RBP13.29□□□□□ -0.28
PRPF6-201ENST00000266079 PPM1KQ8N3J5 372 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 TEKT4Q8WW24 435 aa13.29□□□□□ -0.28
PRPF6-201ENST00000266079 UTP4Q969X6 686 aaKnown RBP13.29□□□□□ -0.28
PRPF6-201ENST00000266079 DDX3XO00571 662 aaKnown RBP eCLIP13.28□□□□□ -0.286e-11■■□□□ 14.3
PRPF6-201ENST00000266079 UNC5CO95185 931 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 CST3P01034 146 aaPredicted RBP13.28□□□□□ -0.28
PRPF6-201ENST00000266079 ATP6V1C1P21283 382 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 PCK1P35558 622 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 PIK3CAP42336 1068 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 PTPN11Q06124 597 aaPredicted RBP13.28□□□□□ -0.28
PRPF6-201ENST00000266079 FAAP100Q0VG06 881 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 GALNT15Q8N3T1 639 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 ZFAND2BQ8WV99 257 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 RMDN2Q96LZ7 410 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 ROPN1BQ9BZX4 212 aaPredicted RBP13.28□□□□□ -0.28
PRPF6-201ENST00000266079 ROPN1Q9HAT0 212 aaPredicted RBP13.28□□□□□ -0.28
PRPF6-201ENST00000266079 GOLGA2P5Q9HBQ8 144 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 ETNK1Q9HBU6 452 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRPF6-201ENST00000266079 PCDHB2Q9Y5E7 798 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 GPR182O15218 404 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 PTGIRP43119 386 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 GALCP54803 685 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 SGSM1Q2NKQ1 1148 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 PARP6Q2NL67 630 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 RNF43Q68DV7 783 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 TRAF7Q6Q0C0 670 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 USP37Q86T82 979 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 ARHGEF19Q8IW93 802 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 CKAP2Q8WWK9 683 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 C18orf25Q96B23 403 aaPredicted RBP13.28□□□□□ -0.28
PRPF6-201ENST00000266079 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 ZMAT2Q96NC0 199 aaKnown RBP13.28□□□□□ -0.28
PRPF6-201ENST00000266079 C11orf49Q9H6J7 331 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 INPP5FQ9Y2H2 1132 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 ASB3Q9Y575 518 aa13.28□□□□□ -0.28
PRPF6-201ENST00000266079 MROH7Q68CQ1 1323 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 TRIP11Q15643 1979 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 TMEM120BA0PK00 339 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 RAD23BP54727 409 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 CCDC15Q0P6D6 951 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 CETN1Q12798 172 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 PHLDB3Q6NSJ2 640 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 SMG8Q8ND04 991 aaKnown RBP13.27□□□□□ -0.28
PRPF6-201ENST00000266079 DBF4BQ8NFT6 615 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 TMC2Q8TDI7 906 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 KCNN1Q92952 543 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 TMEM8AQ9HCN3 771 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 UBE2TQ9NPD8 197 aaPredicted RBP13.27□□□□□ -0.28
PRPF6-201ENST00000266079 OSGEPQ9NPF4 335 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 TMEM39AQ9NV64 488 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 KLHL14Q9P2G3 628 aa13.27□□□□□ -0.28
PRPF6-201ENST00000266079 NBNO60934 754 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 PEX11AO75192 247 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 CD4P01730 458 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 HLA-DRAP01903 254 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 RARGP13631 454 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 SELPP16109 830 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 RPL21P46778 160 aaKnown RBP13.27□□□□□ -0.29
PRPF6-201ENST00000266079 TUBP50607 506 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 YARSP54577 528 aaKnown RBP13.27□□□□□ -0.29
PRPF6-201ENST00000266079 LMNB2Q03252 620 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 MGAT5Q09328 741 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 CLUL1Q15846 466 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 SCARA5Q6ZMJ2 495 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 FBXL13Q8NEE6 735 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 ARHGEF2Q92974 986 aaKnown RBP13.27□□□□□ -0.29
PRPF6-201ENST00000266079 CGRRF1Q99675 332 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 SYT15Q9BQS2 421 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 TXLNGQ9NUQ3 528 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 FAM105AQ9NUU6 356 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 RAB20Q9NX57 234 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 ZMYND8Q9ULU4 1186 aaPredicted RBP13.27□□□□□ -0.29
PRPF6-201ENST00000266079 SIP14410 1827 aa13.27□□□□□ -0.29
PRPF6-201ENST00000266079 VNN1O95497 513 aa13.26□□□□□ -0.29
PRPF6-201ENST00000266079 CALCAP01258 141 aa13.26□□□□□ -0.29
PRPF6-201ENST00000266079 MLH1P40692 756 aa13.26□□□□□ -0.29
PRPF6-201ENST00000266079 DCAF4L1Q3SXM0 396 aa13.26□□□□□ -0.29
PRPF6-201ENST00000266079 VSTM1Q6UX27 236 aa13.26□□□□□ -0.29
PRPF6-201ENST00000266079 ANKLE1Q8NAG6 615 aa13.26□□□□□ -0.29
PRPF6-201ENST00000266079 STK32AQ8WU08 396 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms