RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 HPDLQ96IR7 371 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 FDXACB1Q9BRP7 624 aaPredicted RBP10.8□□□□□ -0.68
LSG1-201ENST00000265245 MAK16Q9BXY0 300 aaKnown RBP10.8□□□□□ -0.68
LSG1-201ENST00000265245 PITPNM3Q9BZ71 974 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 VRTNQ9H8Y1 702 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 HMGXB4Q9UGU5 601 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 USP18Q9UMW8 372 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 FARP1Q9Y4F1 1045 aaPredicted RBP10.8□□□□□ -0.68
LSG1-201ENST00000265245 CFAP73A6NFT4 308 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 APOC4-APOC2K7ER74 178 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 SPAG7O75391 227 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 APOC2P02655 101 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 PSMC4P43686 418 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 LAMC2Q13753 1193 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 TMEM132DQ14C87 1099 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 TAZQ16635 292 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 NBPF20Q3BBV1 942 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 ANKMY2Q8IV38 441 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 PDIK1LQ8N165 341 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 TTC39CQ8N584 583 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 MRRFQ96E11 262 aaKnown RBP10.8□□□□□ -0.68
LSG1-201ENST00000265245 PPP1R16BQ96T49 567 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 PRPF4O43172 522 aaKnown RBP eCLIP10.8□□□□□ -0.68
LSG1-201ENST00000265245 UBOX5O94941 541 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 GCAP28676 217 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 GBP2P32456 591 aaPredicted RBP10.8□□□□□ -0.68
LSG1-201ENST00000265245 SLC18A1P54219 525 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 GDF10P55107 478 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 EIF3EP60228 445 aaKnown RBP10.8□□□□□ -0.68
LSG1-201ENST00000265245 RASA2Q15283 850 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 MTFR1Q15390 333 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 CMASQ8NFW8 434 aaPredicted RBP10.8□□□□□ -0.68
LSG1-201ENST00000265245 CPT1BQ92523 772 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 MCRS1Q96EZ8 462 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 PDZD7Q9H5P4 517 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 AGAP1Q9UPQ3 857 aa10.8□□□□□ -0.68
LSG1-201ENST00000265245 PAPPA2Q9BXP8 1791 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 LGALS2P05162 132 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 CD48P09326 243 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 RBP3P10745 1247 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 TAC1P20366 129 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 CA4P22748 312 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 RPL22P35268 128 aaKnown RBP10.79□□□□□ -0.68
LSG1-201ENST00000265245 PCK1P35558 622 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 GABRB2P47870 512 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 GEMIN4P57678 1058 aaKnown RBP10.79□□□□□ -0.68
LSG1-201ENST00000265245 PKN2Q16513 984 aaKnown RBP10.79□□□□□ -0.68
LSG1-201ENST00000265245 C10orf88Q9H8K7 445 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 GGT7Q9UJ14 662 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 BARX2Q9UMQ3 279 aaPredicted RBP10.79□□□□□ -0.68
LSG1-201ENST00000265245 GPD2P43304 727 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 ZNF143P52747 638 aaPredicted RBP10.79□□□□□ -0.68
LSG1-201ENST00000265245 WDR4P57081 412 aaKnown RBP10.79□□□□□ -0.68
LSG1-201ENST00000265245 RBP5P82980 135 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 CCDC142Q17RM4 750 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
LSG1-201ENST00000265245 DNAJC14Q6Y2X3 702 aaPredicted RBP10.79□□□□□ -0.68
LSG1-201ENST00000265245 MOB2Q70IA6 237 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 ARMCX2Q7L311 632 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 C4orf33Q8N1A6 199 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 FAM71DQ8N9W8 422 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 SPATA18Q8TC71 538 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 CPB2Q96IY4 423 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 CNPY3Q9BT09 278 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 ITGA11Q9UKX5 1188 aa10.79□□□□□ -0.68
LSG1-201ENST00000265245 EME2A4GXA9 379 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 ENO4A6NNW6 628 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 ASMTLO95671 621 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 TRUB2O95900 331 aaKnown RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 ATP2A2P16615 1042 aaKnown RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.686e-6■■■□□ 14.9
LSG1-201ENST00000265245 ARF4P18085 180 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 BASP1P80723 227 aaKnown RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 ARHGAP1Q07960 439 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 TFDP2Q14188 446 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 AMHR2Q16671 573 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 KLHL38Q2WGJ6 581 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 SLC10A6Q3KNW5 377 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 EFHC2Q5JST6 749 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 FAM47EQ6ZV65 393 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 PALM2Q8IXS6 379 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 TAB3Q8N5C8 712 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 NAT8LQ8N9F0 302 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 UBA3Q8TBC4 463 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 NLRP7Q8WX94 980 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 N4BP2L2Q92802 583 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 OPTNQ96CV9 577 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 RXFP1Q9HBX9 757 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 FETUBQ9UGM5 382 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 KIAA1257Q9ULG3 409 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 C2CD2Q9Y426 696 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 PPP1R12AO14974 1030 aaPredicted RBP10.78□□□□□ -0.68
LSG1-201ENST00000265245 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 PDGFRAP16234 1089 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 GPD1P21695 349 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 CDH6P55285 790 aa10.78□□□□□ -0.68
LSG1-201ENST00000265245 BBS9Q3SYG4 887 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms