RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 TRIM11Q96F44 468 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 RBM17Q96I25 401 aaKnown RBP16.96■□□□□ 0.31
GPC1-201ENST00000264039 AP4B1Q9Y6B7 739 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 F8VP50 259 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 LSM1O15116 133 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 TM9SF1O15321 606 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 FOSP01100 380 aaPredicted RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 FAM58BPP0C7Q3 252 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 POLD1P28340 1107 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 HPCAP84074 193 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 SFSWAPQ12872 951 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 IL31Q6EBC2 164 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 NLRX1Q86UT6 975 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 ZNF786Q8N393 782 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 DIS3LQ8TF46 1054 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 SERPINI1Q99574 410 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 SEPT10Q9P0V9 454 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 RPL26L1Q9UNX3 145 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 C4AP0C0L4 1744 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 C4BP0C0L5 1744 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 TESPA1A2RU30 521 aaPredicted RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 TRMUO75648 421 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 SNRPAP09012 282 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 FGFR1P11362 822 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 DMP1Q13316 513 aaPredicted RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 ABHD8Q96I13 439 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 SCYL1Q96KG9 808 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 ZC3H12CQ9C0D7 883 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 RNF103-CHMP3A0A140T963 221 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 PROSCO94903 275 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 PSMC3P17980 439 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 RPL7AP62424 266 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 VWA5B1Q5TIE3 1220 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 PLEKHA7Q6IQ23 1121 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 MCOLN2Q8IZK6 566 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 C7orf43Q8WVR3 580 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 KREMEN1Q96MU8 473 aa16.95■□□□□ 0.3
GPC1-201ENST00000264039 WARS2Q9UGM6 360 aaKnown RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 TRPC5Q9UL62 973 aaPredicted RBP16.95■□□□□ 0.3
GPC1-201ENST00000264039 CCDC78A2IDD5 438 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 PRPF4O43172 522 aaKnown RBP eCLIP16.94■□□□□ 0.3
GPC1-201ENST00000264039 RFX1P22670 979 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 ETFBP38117 255 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 MORF4L2Q15014 288 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 ANKRD22Q5VYY1 191 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 PPIL6Q8IXY8 311 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 SPATA18Q8TC71 538 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 ZMAT2Q96NC0 199 aaKnown RBP16.94■□□□□ 0.3
GPC1-201ENST00000264039 HAUS8Q9BT25 410 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 SOX10P56693 466 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 ACTR3P61158 418 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 PSMC5P62195 406 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 AOC3Q16853 763 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 SEZ6Q53EL9 994 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 YIPF2Q9BWQ6 316 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 EPS15L1Q9UBC2 864 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 LRRC37A3O60309 1634 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 PRELPP51888 382 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 TRPC3Q13507 836 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 GEN1Q17RS7 908 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 SH3D19Q5HYK7 790 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 PLA2G4FQ68DD2 849 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 ANKRD23Q86SG2 305 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 SNX13Q9Y5W8 968 aa16.94■□□□□ 0.3
GPC1-201ENST00000264039 MTTPP55157 894 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 OSTNP61366 133 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 VTI1AQ96AJ9 217 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 KCNK16Q96T55 309 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 FERMT1Q9BQL6 677 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 BCAP29Q9UHQ4 241 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 AURKCQ9UQB9 309 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 A0A0J9YVX5 310 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 ZBED1O96006 694 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 OCM2P0CE71 109 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 OCMP0CE72 109 aaPredicted RBP16.93■□□□□ 0.3
GPC1-201ENST00000264039 MAGEA8P43361 318 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 LPIN1Q14693 890 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 CEP55Q53EZ4 464 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 RBM12BQ8IXT5 1001 aaKnown RBP16.93■□□□□ 0.3
GPC1-201ENST00000264039 RCOR2Q8IZ40 523 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 DDHD1Q8NEL9 900 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 APOPT1Q96IL0 206 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 MPHOSPH6Q99547 160 aaKnown RBP16.93■□□□□ 0.3
GPC1-201ENST00000264039 ARHGEF37A1IGU5 675 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 F5H6K3 240 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 ECE2O60344 883 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 TNFAIP8O95379 198 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 SESN2P58004 480 aaPredicted RBP16.93■□□□□ 0.3
GPC1-201ENST00000264039 TMEM63BQ5T3F8 832 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 CMTM5Q96DZ9 223 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 SERAC1Q96JX3 654 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 WRNIP1Q96S55 665 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 CDRT15Q96T59 188 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 ARMC7Q9H6L4 198 aa16.93■□□□□ 0.3
GPC1-201ENST00000264039 MYO5AQ9Y4I1 1855 aaKnown RBP16.92■□□□□ 0.3
GPC1-201ENST00000264039 N4BP2Q86UW6 1770 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms